Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq8 158 2e-32
seq1 156 7e-32
seq12 149 1e-29
seq20 87.8 3e-11
>seq8
Length=717457
Score = 158 bits (174), Expect = 2e-32
Identities = 182/244 (75%), Gaps = 6/244 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||| |||||||| || || |||||||||||| |||| ||||| || | |
Sbjct 337778 TGAACTTGGTGACAGCCTTGGTGCCTTCAGAGACGGCGTGCTTGGCGAGTTCACCCGGGA 337719
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG---TGCCGATCGTGTTGCGCTTGTTAG 1485586
||| || || || || || ||||| || |||| || || ||| || ||||||
Sbjct 337718 GGATGAGTCGGACAGCCGTTTGGATTTCACGGGAGGTGACGGTCGGCTT---CTTGTTGT 337662
Query 1485587 TGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
||||| || | |||| ||||| |||| |||| |||||||||| |||||||
Sbjct 337661 ATCGCGCGAGCTTGGCGGCTTCGGTCGCGATCTTCTCGAAGATGTCGTTGATGAACGAGT 337602
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
||||||| ||||| | ||| ||||||||| ||| |||||||| |||||||| ||||
Sbjct 337601 TCATGATGGACATGGCCTTGGAGGAGATGCCGGTGTCCGGGTGCACTTGCTTGAGGACCT 337542
Query 1485707 TGTA 1485710
||||
Sbjct 337541 TGTA 337538
Score = 156 bits (172), Expect = 7e-32
Identities = 233/324 (72%), Gaps = 10/324 (3%)
Strand=Plus/Plus
Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952
|| |||||||| || ||||| |||||| |||||| |||||||||||||| | ||||
Sbjct 89686 ACACCCGCCTTTTGGTATTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCTTGGAGC 89745
Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCAC-CCGAG 794011
||||| | |||||||| |||||||| ||||| ||| | ||| ||| || ||
Sbjct 89746 GAGATGAGTTCCATCCAGTCAAACGGGTTCGCCGTGTTGTACTCCTTGG-GCATACCAAG 89804
Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071
|| | | || | ||||||||||| |||||||||| | || ||| | ||||||||||
Sbjct 89805 GGAGGTGAACAAGTGGTCGGCGACGTATTCAATGTAGTCGCTCATCATACCGGCGTTCAT 89864
Query 794072 GCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|| | |||||| ||| || || || |||| || ||||| ||||||||||| || || |
Sbjct 89865 ACCAACGAGCGCGCAC-GGAAGAGAGTCGCACACGAACTCCTTCTCGATCTCAACCGCTT 89923
Query 794131 CGATGATGATCTGCCTGGGCACG---TCGGACGACGGCTTGTCGACGAGCATCGTGTAGA 794187
|| ||| |||| | ||||| || |||||||| | |||||| ||| |
Sbjct 89924 CGGTGACAATCT---TACGCACGACTTCTTCGTCCGGCTTGTTGTTGAGCATTTGGTATA 89980
Query 794188 GCAGGCAGGCAAAGTCGCAATGCA 794211
||||| |||||||| | ||||
Sbjct 89981 AGAGGCAAGCAAAGTCACGGTGCA 90004
Score = 120 bits (132), Expect = 5e-21
Identities = 187/267 (70%), Gaps = 8/267 (3%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| || |||||| ||| | |||||| ||| | || ||||| || |||||||||
Sbjct 90007 CCCTCATCGCGAGAGATGAGCTCGTTGGAGAAGGTCAAACCCGGCATAAGACCGCGCTTC 90066
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| ||||| |||||| ||||| || ||||| ||||| ||||| | | || ||
Sbjct 90067 TTAAGCCAGTAGATGGAGCAGAACGAACCAGAGAAGAAGATACCCTCAATGCACGCGAAC 90126
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTC-CAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| | || ||||||||||| | ||| | || || |||||||||| ||||||
Sbjct 90127 GCCAGCAGACGCTCGGCAAACGAGTCGCTGGA-------GTCAATCCACTTCAACGCCCA 90179
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579
|| ||||| ||| | || | || | || ||||| ||||| || | |||| ||||||
Sbjct 90180 GTCAGCCTTCTTCTTAACGCATGGGATGGTCTCGATAGCGCGGAACAAGTGGCTCTTCTC 90239
Query 794580 GACCGGGTCCTTGACGTAGGTGTCGAT 794606
| |||| ||||||||||| ||||||
Sbjct 90240 GGCCGGATCCTTGACGTACTGGTCGAT 90266
>seq1
Length=1096037
Score = 156 bits (172), Expect = 7e-32
Identities = 155/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 2071812 CTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTC 2071871
|||| |||||| | | || ||| |||||| | | | ||||| |||||||| |||
Sbjct 14450 CTCGTTCGGGCACATCAACGTCCATTCGCCGTTCGCCTCGACGCGCTTCATAAACAAGTC 14391
Query 2071872 GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 2071931
| ||||||||||||||| || ||||||||||| || |||||||| |||||||||||
Sbjct 14390 GTTCGTCCACAGGCCGTAGAACAGATCGCGCGCGCGCGCTTCCTCCTTACCGTGGTTCTT 14331
Query 2071932 TTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 2071991
|| ||| |||||||| | || ||| |||||||||||||| |||||| ||| || ||
Sbjct 14330 ACGCAAGTCAAGCCAGTCAAAGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCGAACGC 14271
Query 2071992 GCCCTTGCGCTTGCCGCCGCC 2072012
||||||||||| || || ||
Sbjct 14270 TCCCTTGCGCTTACCACCACC 14250
Score = 132 bits (146), Expect = 8e-25
Identities = 187/263 (71%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||| || ||||| ||||||||||| || || || ||||| || | | |||||| |||
Sbjct 14248 TGGTCCACGTAGCGAGCCGTGTCGTTGAACACACGCAGCATCGGAATGATGCCGTTCGAC 14189
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
||||||||||| | ||| | || || || || | | ||| || || |||
Sbjct 14188 GTTCCGTTGGTGCCTCGAATGTAAGAGCTCGTAGCTCGGATATCGTGGATGGACAAACCG 14129
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || ||||| | || || || |||||||| |||||||| ||||| |||||||||
Sbjct 14128 ATACCTCCGGCAGATTTTGAAATACACGCGCACTCCTTCAGCGTGTCGTAAATGCCCTCG 14069
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| || || |||||||| | || |||||||| || ||||| |||| || ||
Sbjct 14068 ATGGAATCTTCCTTCATGCAAATCAAGAAGCACGAAGAAAGCTGCGGACGCGGGGTACCA 14009
Query 2073781 GCATTGAAGAGCGTGGGCGTCGC 2073803
|| ||||| | ||| |||| |||
Sbjct 14008 GCGTTGAACAACGTCGGCGACGC 13986
>seq12
Length=542657
Score = 149 bits (164), Expect = 1e-29
Identities = 180/244 (74%), Gaps = 6/244 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| || |||||||| || || || ||||||||| | || || || || | |
Sbjct 159826 TGAACTTGGTCACCGCCTTGGTCCCTTCGGACACGGCGTGCTTCGCGAGCTCACCCGGGA 159767
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG---TGCCGATCGTGTTGCGCTTGTTAG 1485586
||| || || ||||| || ||||||||||||| | | ||| || ||||||
Sbjct 159766 GGATGAGTCGGACGGCCGTTTGGATCTCGCGGGACGTCACCGTCGGCTT---CTTGTTGT 159710
Query 1485587 TGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
||||| || | |||||||||| |||| |||| |||||||||| |||||||
Sbjct 159709 ATCGCGCGAGCTTGGCGGCCTCGGTCGCGATCTTCTCGAAGATGTCGTTGATGAACGAGT 159650
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
||||||| ||||| | ||| ||||||||| ||| |||||||| |||||||| ||||
Sbjct 159649 TCATGATGGACATGGCCTTGGAGGAGATGCCGGTGTCTGGGTGCACTTGCTTGAGGACCT 159590
Query 1485707 TGTA 1485710
||||
Sbjct 159589 TGTA 159586
>seq20
Length=165357
Score = 87.8 bits (96), Expect = 3e-11
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
|||| ||||| | || || |||||| | || || || || || ||| | |||| ||
Sbjct 98624 AGGTGGACCAGGCGACGCTGTTTGAGATCATTCTGGCGGCGAATTACTTGAACATGAAAG 98683
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
| | ||||| ||| ||||| ||| ||||| ||| | || || || ||| |||| ||||
Sbjct 98684 GCTTGCTCGACTTGACGTGCATGACGGTGGCGAACATGATGAAAGGGAAGACGCCGGAGG 98743
Query 2035732 ACATCCGCAAGACCTTTAACATCAAG 2035757
| || || ||||| ||||||||||||
Sbjct 98744 AGATTCGAAAGACGTTTAACATCAAG 98769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916244272508780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |