Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq8 102 7e-17 seq12 89.7 4e-13 seq7 89.7 4e-13 >seq8 Length=717457 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 ||||| || ||| | || ||||||||| | | |||| ||||| || ||||| ||| Sbjct 310515 GATAAGGAGGGCATCCCGCCGGATCAGCAACGTTTGATTTTCGCGGGGAAGCAGCTCGAG 310574 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||| | || ||||||| |||||||| ||||||||||||||| | ||| |||||||| Sbjct 310575 GACGGCCGCACGTTGGCGGATTACAACATCCAAAAGGAGTCTACGCTCCACTTGGTGTTG 310634 Query 107769 AGATTGCGAGGGGG 107782 | |||||||| || Sbjct 310635 CGCTTGCGAGGTGG 310648 >seq12 Length=542657 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || || || | || ||||| |||||||| ||||| |||| | Sbjct 189118 ATGCAAATCTTCGTGAAGACGCTCACGGGCAAGACCATTACGCTCGAAGTGGAGTCCTCG 189177 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || ||||| || || |||||| | || ||||||| Sbjct 189178 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAG 189237 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | || | || ||||| ||||| ||||||| || |||| ||||||||| Sbjct 189238 CAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAAC 189297 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| ||||| | | ||||| || || Sbjct 189298 ATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGG 189344 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || || || | || || || |||||||| ||||| |||| | Sbjct 189346 ATGCAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCG 189405 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || ||||| || || |||||| | || ||||||| Sbjct 189406 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAG 189465 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | || | || ||||| ||||| ||||||| || |||| ||||||||| Sbjct 189466 CAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAAC 189525 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| ||||| | | ||||| || || Sbjct 189526 ATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGG 189572 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || || || | || || || |||||||| ||||| |||| | Sbjct 189574 ATGCAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCG 189633 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || ||||| || || |||||| | || ||||||| Sbjct 189634 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAG 189693 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | || | || ||||| ||||| ||||||| || |||| ||||||||| Sbjct 189694 CAACGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAAC 189753 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| ||||| | | ||||| || || Sbjct 189754 ATCCAGAAGGAGTCCACGCTCCACTTGGTGCTCCGCTTGCGCGGTGG 189800 >seq7 Length=770246 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 107669 GGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGA 107728 ||||||||| | || || | |||||||| || || ||||||| | || | || || Sbjct 134534 GGATCAGCAACGTCTGATCTTCGCGGGTAAGCAACTCGAGGACGGCCGCACGCTCGCCGA 134593 Query 107729 CTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||| ||||||||||| ||| | ||| |||||||| | ||||| ||||| Sbjct 134594 CTACAACATCCAAAAGGAGTCCACGCTCCACTTGGTGTTGCGCTTGCGCGGGGG 134647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876702773780