Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-13 >seq2 Length=1074072 Score = 93.3 bits (102), Expect = 3e-13 Identities = 232/353 (66%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||||||||| || ||||| | ||||| ||| ||| | | |||| ||| | || Sbjct 262261 TCAAAATCTTCGCCGCCCAAGTGAGTATCTCCGTTCGTCGAGATCACTTCGAACACGCCG 262202 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | |||| | | || | || ||| ||| || || || | ||| || | || | | Sbjct 262201 TTGTCAATGGTAAGAATGGATACGTCAAAGGTCCCTCCGCCAAGATCGAAGACGAGGATA 262142 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || ||| || ||||| || | || || || | || || ||||| || || Sbjct 262141 TT------TTTCTCGCCCTTTTTGTCCAAGCCGTAAGCGATTGCCGCGGCAGTAGGCTCG 262088 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || |||||||| || || |||||||| || |||| |||||||| |||||||| | Sbjct 262087 TTGATAATTCTTGCCACGTTTAGACCAGCGATGATTCCCGCATCTTTGGTGGCTTGACGC 262028 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | ||| || ||||| || ||||| || | ||||| | | | || || || | Sbjct 262027 TGGGCATCATTGAAATAGGCGGGAACCGTCACCACGGCGTTCTTGATGTCCTTGCCGAGG 261968 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546 || || || |||| ||||||||| | | || ||| | ||||||| ||| Sbjct 261967 TATGCCTCAGCAGTTTCCTTCATTTTAGTGAGAACCATCGCGGAAATTTCTTC 261915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629418084520