Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 3e-13
>seq2
Length=1074072
Score = 93.3 bits (102), Expect = 3e-13
Identities = 232/353 (66%), Gaps = 6/353 (2%)
Strand=Plus/Minus
Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253
||||||||||| || ||||| | ||||| ||| ||| | | |||| ||| | ||
Sbjct 262261 TCAAAATCTTCGCCGCCCAAGTGAGTATCTCCGTTCGTCGAGATCACTTCGAACACGCCG 262202
Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313
| |||| | | || | || ||| ||| || || || | ||| || | || | |
Sbjct 262201 TTGTCAATGGTAAGAATGGATACGTCAAAGGTCCCTCCGCCAAGATCGAAGACGAGGATA 262142
Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373
|| ||| || ||||| || | || || || | || || ||||| || ||
Sbjct 262141 TT------TTTCTCGCCCTTTTTGTCCAAGCCGTAAGCGATTGCCGCGGCAGTAGGCTCG 262088
Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433
|| |||||||| || || |||||||| || |||| |||||||| |||||||| |
Sbjct 262087 TTGATAATTCTTGCCACGTTTAGACCAGCGATGATTCCCGCATCTTTGGTGGCTTGACGC 262028
Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493
|| | ||| || ||||| || ||||| || | ||||| | | | || || || |
Sbjct 262027 TGGGCATCATTGAAATAGGCGGGAACCGTCACCACGGCGTTCTTGATGTCCTTGCCGAGG 261968
Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546
|| || || |||| ||||||||| | | || ||| | ||||||| |||
Sbjct 261967 TATGCCTCAGCAGTTTCCTTCATTTTAGTGAGAACCATCGCGGAAATTTCTTC 261915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740629418084520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |