Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 2e-12 >seq12 Length=542657 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| || || || || | || || || | || || || || || |||||||| ||| Sbjct 189345 GCCACCGCGCAAGCGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 189286 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| ||| ||||| || ||||| || |||||| |||||||||||| || || Sbjct 189285 CAAAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGG 189226 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| || || || | | || | ||||| | || || || Sbjct 189225 GATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 189166 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||| | || | |||||||| || | || || ||||| |||||||| Sbjct 189165 TTCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTCACGAAGATTTGCAT 189118 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 137183 GGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGC 137242 |||| || || || || | || || || | || || || || || |||||||| ||| Sbjct 189802 GGCCACCGCGCAAGCGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGG 189743 Query 137243 TCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 || |||| ||| ||||| || ||||| || |||||| |||||||||||| || | Sbjct 189742 CCAAAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCG 189683 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | |||||||| ||||| || || || | | || | ||||| | || || | Sbjct 189682 GGATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCA 189623 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| | || | ||||| || || | || || ||||| |||||||| Sbjct 189622 CTTCGAGCGTAATGGTCTTACCCGTGAGCGTCTTCACGAAGATTTGCAT 189574 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| || || || || | || || || | || || || || || |||||||| ||| Sbjct 189573 GCCACCGCGCAAGCGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 189514 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| ||| ||||| || ||||| || |||||| |||||||||||| || || Sbjct 189513 CAAAGTGCGACCGTCCTCGAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGG 189454 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| || || || | | || | ||||| | || || || Sbjct 189453 GATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 189394 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||| | || | ||||| || || | || || ||||| |||||||| Sbjct 189393 TTCGAGCGTAATGGTCTTACCCGTGAGCGTCTTCACGAAGATTTGCAT 189346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543877864000