Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 8e-14 seq8 89.7 1e-12 seq13 84.2 4e-11 >seq7 Length=770246 Score = 93.3 bits (102), Expect = 8e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | ||| |||| || ||||| || || || || || || || || || || | Sbjct 134648 ACCCCCGCGCAAGCGCAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGC 134589 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | ||||| || ||||| || || || ||||| || | ||| ||||| || || Sbjct 134588 GAGCGTGCGGCCGTCCTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGG 134529 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||||||||| ||||| || || || || || || || || | || || Sbjct 134528 GATCCCCTCCTTATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 134469 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCA 82788 ||||| || || ||||| || |||| Sbjct 134468 CTCCAAGGTGATGGTCTTACCCGTCA 134443 >seq8 Length=717457 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| ||| |||| || ||||| || ||||| || || || || || ||||| | Sbjct 310650 TACCACCTCGCAAGCGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCG 310591 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | ||||| || || || || || || || || | | ||| ||||| || | Sbjct 310590 CCAACGTGCGGCCGTCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCG 310531 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||| || || || || || || || || | || | Sbjct 310530 GGATGCCCTCCTTATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCA 310471 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788 | ||||| || || ||||| || |||| Sbjct 310470 CCTCCAAGGTGATGGTCTTACCAGTCA 310444 >seq13 Length=549623 Score = 84.2 bits (92), Expect = 4e-11 Identities = 180/263 (68%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 198339 CTATGGAATGCATCGCAAATACAGATGATAAGAGA-AGGAAAAATGCATAGTTTTTTAAG 198397 |||||||| || |||||| | || || || | ||||| ||||| | || | || Sbjct 291943 CTATGGAACGCGGCGCAAAAAGAGCTG-TATCATCTAGGAAGGATGCACGGATTCATGAG 292001 Query 198398 AATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGC-TTTGAGTT 198456 |||||||||||| || |||||||| || ||||| | |||||| || ||||| Sbjct 292002 AATGTACTGGGCAAAGAAGATACTCGAGTGGACGCCGTCTCCGGAAATTGCGCTTGAG-- 292059 Query 198457 ATAG-TATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTA 198515 | || ||| | || ||| | | ||| | ||||||| ||||| ||||| ||||| Sbjct 292060 ACAGCCATCCAACTCAACGACACGTATGCTTTAGACGGACTCGATCCGAACGGCTACGTC 292119 Query 198516 GGTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTT 198575 || || |||||||| || ||| | || |||| || ||||||||| | | | || Sbjct 292120 GGATGCATGTGGTCAATCGCCGGCGTGCACGATCAAGGGTGGAAAGAGCGCGCCGTCTTC 292179 Query 198576 GGGAAGATAAGATATATGAATTA 198598 || ||| | | |||||||| || Sbjct 292180 GGCAAGGTTCGGTATATGAACTA 292202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826948406780