Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq7 93.3 8e-14
seq8 89.7 1e-12
seq13 84.2 4e-11
>seq7
Length=770246
Score = 93.3 bits (102), Expect = 8e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || | ||| |||| || ||||| || || || || || || || || || || |
Sbjct 134648 ACCCCCGCGCAAGCGCAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGC 134589
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | ||||| || ||||| || || || ||||| || | ||| ||||| || ||
Sbjct 134588 GAGCGTGCGGCCGTCCTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGG 134529
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || ||||||||||| ||||| || || || || || || || || | || ||
Sbjct 134528 GATCCCCTCCTTATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 134469
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCA 82788
||||| || || ||||| || ||||
Sbjct 134468 CTCCAAGGTGATGGTCTTACCCGTCA 134443
>seq8
Length=717457
Score = 89.7 bits (98), Expect = 1e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||| ||| |||| || ||||| || ||||| || || || || || ||||| |
Sbjct 310650 TACCACCTCGCAAGCGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCG 310591
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | ||||| || || || || || || || || | | ||| ||||| || |
Sbjct 310590 CCAACGTGCGGCCGTCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCG 310531
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||||||||| ||||| || || || || || || || || | || |
Sbjct 310530 GGATGCCCTCCTTATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCA 310471
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788
| ||||| || || ||||| || ||||
Sbjct 310470 CCTCCAAGGTGATGGTCTTACCAGTCA 310444
>seq13
Length=549623
Score = 84.2 bits (92), Expect = 4e-11
Identities = 180/263 (68%), Gaps = 6/263 (2%)
Strand=Plus/Plus
Query 198339 CTATGGAATGCATCGCAAATACAGATGATAAGAGA-AGGAAAAATGCATAGTTTTTTAAG 198397
|||||||| || |||||| | || || || | ||||| ||||| | || | ||
Sbjct 291943 CTATGGAACGCGGCGCAAAAAGAGCTG-TATCATCTAGGAAGGATGCACGGATTCATGAG 292001
Query 198398 AATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGC-TTTGAGTT 198456
|||||||||||| || |||||||| || ||||| | |||||| || |||||
Sbjct 292002 AATGTACTGGGCAAAGAAGATACTCGAGTGGACGCCGTCTCCGGAAATTGCGCTTGAG-- 292059
Query 198457 ATAG-TATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTA 198515
| || ||| | || ||| | | ||| | ||||||| ||||| ||||| |||||
Sbjct 292060 ACAGCCATCCAACTCAACGACACGTATGCTTTAGACGGACTCGATCCGAACGGCTACGTC 292119
Query 198516 GGTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTT 198575
|| || |||||||| || ||| | || |||| || ||||||||| | | | ||
Sbjct 292120 GGATGCATGTGGTCAATCGCCGGCGTGCACGATCAAGGGTGGAAAGAGCGCGCCGTCTTC 292179
Query 198576 GGGAAGATAAGATATATGAATTA 198598
|| ||| | | |||||||| ||
Sbjct 292180 GGCAAGGTTCGGTATATGAACTA 292202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826948406780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |