Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 102 2e-16 >seq12 Length=542657 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || || || | |||||||| || ||||| |||| Sbjct 189133 AAGACGCTCACGGGCAAGACCATTACGCTCGAAGTGGAGTCCTCGGACACCATCGACAAC 189192 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| || |||||| ||| | | |||||| Sbjct 189193 GTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAGCAACGTTTGATCTTC 189252 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || | ||||||||||| |||||| ||||||| ||||| Sbjct 189253 GCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAACATCCAGAAGGAGTCC 189312 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 189313 ACGCTCCAC 189321 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || || || | |||||||| || ||||| |||| Sbjct 189361 AAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCGGACACCATCGACAAC 189420 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| || |||||| ||| | | |||||| Sbjct 189421 GTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAGCAACGTTTGATCTTC 189480 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || | ||||||||||| |||||| ||||||| ||||| Sbjct 189481 GCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAACATCCAGAAGGAGTCC 189540 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 189541 ACGCTCCAC 189549 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || || || | |||||||| || ||||| |||| Sbjct 189589 AAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCGGACACCATCGACAAC 189648 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| || |||||| ||| | | |||||| Sbjct 189649 GTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAGCAACGTTTGATCTTC 189708 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || | ||||||||||| |||||| ||||||| ||||| Sbjct 189709 GCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAACATCCAGAAGGAGTCC 189768 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 189769 ACGCTCCAC 189777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820497158420