Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 156 5e-33 >seq1 Length=1096037 Score = 156 bits (172), Expect = 5e-33 Identities = 288/416 (69%), Gaps = 6/416 (1%) Strand=Plus/Minus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 ||||| || || || ||||| ||| ||||||| ||| || ||| || || || Sbjct 961599 TTCAGCGGTTCGACATGGTTTGAGTACACGTGCGTGTCTCCACAAACGTGGACGAAATCG 961540 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || ||||| ||| || ||| || || | |||| |||||||||| ||||| || ||| Sbjct 961539 CCAGGCTTGAGGTCGCACACTTGCGCGATCATGCAGGTGAGCAGGGAGTACGACGCGATG 961480 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC 147096 ||||| ||||| || || |||||||| | ||| | |||||||| ||||| | || Sbjct 961479 TTGAACGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACATTTGGCAGCTCAATTCG 961420 Query 147097 CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGG 147156 |||| ||| ||||| |||||||| | ||||||||||||||||| ||||| | || Sbjct 961419 CCGTTGGCGACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGAGCCATTTCCTTTAGC 961360 Query 147157 TCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC--TCGGGGTTCCTCTTAATCT 147214 | || || ||||| || | | | | || | | || || || || |||| |||| Sbjct 961359 GCTGCCGGATTCCATGCTGTAAGTAAGATGCGAC-GATCGGTC-GGATTATTCTTGATCT 961302 Query 147215 CTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCC 147273 | ||||||| || || || ||||||| |||| |||| | | | ||| || | Sbjct 961301 TGTTGATAACCTCGGCCAATTGATCAACGCCCTTGCCCGTGTAG-TCGGCGTGCATGTTC 961243 Query 147274 ACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||| ||| |||||||| ||||| ||||| ||||| || || || || || || Sbjct 961242 GTGTATTCGGCGCCAAAGTGTCTCCATTGGAAACCGTAAACGGGGCCGAGATCACC 961187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487854128000