Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 158 1e-33
seq8 127 2e-24
seq7 114 1e-20
>seq12
Length=542657
Score = 158 bits (174), Expect = 1e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| |||||||| ||||| || |||||||||||| | | ||| || ||| ||
Sbjct 189555 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTC 189496
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|||||| || || || || |||||||| |||||||| ||||| |||||||| || |||||
Sbjct 189495 GAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTG 189436
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || ||||| ||| | ||||| || || ||||| ||||| |||||||| ||
Sbjct 189435 GATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTT 189376
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||| || | || || ||||| ||||||||
Sbjct 189375 ACCCGTGAGCGTCTTCACGAAGATTTGCAT 189346
Score = 158 bits (174), Expect = 1e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| |||||||| ||||| || |||||||||||| | | ||| || ||| ||
Sbjct 189783 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTC 189724
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|||||| || || || || |||||||| |||||||| ||||| |||||||| || |||||
Sbjct 189723 GAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTG 189664
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || ||||| ||| | ||||| || || ||||| ||||| |||||||| ||
Sbjct 189663 GATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTT 189604
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||| || | || || ||||| ||||||||
Sbjct 189603 ACCCGTGAGCGTCTTCACGAAGATTTGCAT 189574
Score = 154 bits (170), Expect = 1e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| |||||||| ||||| || |||||||||||| | | ||| || ||| ||
Sbjct 189327 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCGTCCTC 189268
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|||||| || || || || |||||||| |||||||| ||||| |||||||| || |||||
Sbjct 189267 GAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCTTG 189208
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || ||||| ||| | ||||| || || ||||| ||||| |||||||| ||
Sbjct 189207 GATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACTTCGAGCGTAATGGTCTT 189148
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || ||||| ||||||||
Sbjct 189147 GCCCGTGAGCGTCTTCACGAAGATTTGCAT 189118
Score = 89.7 bits (98), Expect = 5e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| |||||||| ||||| || |||||||||||| | | ||| || || ||
Sbjct 189099 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTGCGACCATCCTC 189040
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCT 134612
|||||| || || || || |||||||| |||||||| ||||| || |||
Sbjct 189039 GAGCTGCTTACCGGCGAAGATCAAACGTTGCTGATCCGGCGGGATCCCT 188991
>seq8
Length=717457
Score = 127 bits (140), Expect = 2e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGA 134557
|||||||| | ||| ||||| || |||||||| |||||||| || ||||||| || |
Sbjct 310636 CGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCCAACG-TGCGGCC 310578
Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617
||| |||||||| || || || ||||||||||| |||||||| ||||| ||||| || ||
Sbjct 310577 GTCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCGGGATGCCCTCCTT 310518
Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
||||| || || || || ||| | ||||| || || ||||| || | || ||
Sbjct 310517 ATCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGAT 310458
Query 134678 GGTTTTACCGGT 134689
||| ||||| ||
Sbjct 310457 GGTCTTACCAGT 310446
>seq7
Length=770246
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558
|||||||| | ||| |||||||| |||||||| |||||||||||| | | ||| | |
Sbjct 134635 CGCAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCGAGCGTGCGGCCG 134576
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| ||||| || || || || || |||| ||| |||||||| ||||| || || || ||
Sbjct 134575 TCCTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGGGATCCCCTCCTTA 134516
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
||||| || || || || ||| | ||||| || || ||||| || | || |||
Sbjct 134515 TCTTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATG 134456
Query 134679 GTTTTACCGGT 134689
|| ||||| ||
Sbjct 134455 GTCTTACCCGT 134445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398273650400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |