Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1 116 1e-20 seq12 95.1 4e-14 >seq1 Length=1096037 Score = 116 bits (128), Expect = 1e-20 Identities = 94/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||||| || || ||| | |||||||||||| || |||||||||||| || ||||| || Sbjct 14195 CGGCATCATTCCGATGCTGCGTGTGTTCAACGACACGGCTCGCTACGTGGACCAAGGTGG 14254 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 || || ||| ||||||||| |||||||||| |||||||||||||| ||||| Sbjct 14255 TGGTAAGCGCAAGGGAGCGTTCGCCATCTACCTCGAGCCGTGGCACGCAGACAT 14308 >seq12 Length=542657 Score = 95.1 bits (104), Expect = 4e-14 Identities = 123/166 (74%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 443697 AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTG-GTCGAAGGACTGTTGTTTAGCGGCAG 443755 ||||||| ||| | || || | || || ||| ||||||||| | || || || || Sbjct 198198 AGCTTCGCCGAAAGGCTGGTGGGATTCGC-GTGCGTCGAAGGAATCTTCTTCAGTGGGTC 198140 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 || || ||||||||||| |||||||||| ||| | |||| |||| | ||||| | Sbjct 198139 ATTCTGCG-CCATCTTCTGGCTGAAAAAGCGAGGATTGATGCGCGGTTTAACCTTCTCCA 198081 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 |||| || ||||| || ||||| || ||||| ||||||||||| || Sbjct 198080 ACGAGCTCATCAGCCGAGACGAAGGCTTGCACTGCGACTTCGCTTG 198035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335592988900