Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 1e-20
seq12 95.1 4e-14
>seq1
Length=1096037
Score = 116 bits (128), Expect = 1e-20
Identities = 94/114 (82%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
|||||| || || ||| | |||||||||||| || |||||||||||| || ||||| ||
Sbjct 14195 CGGCATCATTCCGATGCTGCGTGTGTTCAACGACACGGCTCGCTACGTGGACCAAGGTGG 14254
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084
|| || ||| ||||||||| |||||||||| |||||||||||||| |||||
Sbjct 14255 TGGTAAGCGCAAGGGAGCGTTCGCCATCTACCTCGAGCCGTGGCACGCAGACAT 14308
>seq12
Length=542657
Score = 95.1 bits (104), Expect = 4e-14
Identities = 123/166 (74%), Gaps = 3/166 (2%)
Strand=Plus/Minus
Query 443697 AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTG-GTCGAAGGACTGTTGTTTAGCGGCAG 443755
||||||| ||| | || || | || || ||| ||||||||| | || || || ||
Sbjct 198198 AGCTTCGCCGAAAGGCTGGTGGGATTCGC-GTGCGTCGAAGGAATCTTCTTCAGTGGGTC 198140
Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815
|| || ||||||||||| |||||||||| ||| | |||| |||| | ||||| |
Sbjct 198139 ATTCTGCG-CCATCTTCTGGCTGAAAAAGCGAGGATTGATGCGCGGTTTAACCTTCTCCA 198081
Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861
|||| || ||||| || ||||| || ||||| ||||||||||| ||
Sbjct 198080 ACGAGCTCATCAGCCGAGACGAAGGCTTGCACTGCGACTTCGCTTG 198035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335592988900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |