Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 >seq1 Length=1096037 Score = 143 bits (158), Expect = 2e-29 Identities = 393/601 (65%), Gaps = 6/601 (1%) Strand=Plus/Minus Query 29863 GAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG 29922 ||| || ||||||||||||| || | | ||| ||||| | |||||| ||| Sbjct 961609 GAGTTGCTTCTTCAGCGGTTCGACATGGTTTGAGTACACGTGCGTGTCTCCACAAACGTG 961550 Query 29923 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 29982 ||| || || || || | || || || || || |||||| | ||||| || ||||| Sbjct 961549 GACGAAATCGCCAGGCTTGAGGTCGCACACTTGCGCGATCATGCAGGTGAGCAGGGAGTA 961490 Query 29983 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 |||||||| || || || ||||| |||||||| | ||| | |||||| | || || Sbjct 961489 CGACGCGATGTTGAACGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACATTTGGCA 961430 Query 30043 CGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102 | || |||| | ||||| ||||| || | ||||||||| || |||||||| Sbjct 961429 GCTCAATTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGAGCCAT 961370 Query 30103 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 30162 | || || ||||| || | | |||||| | || || || || Sbjct 961369 TTCCTTTAGCGCTGCCGGATTCCATGCTGTAAGTAAGATGCGACGATCGGTCGGATTATT 961310 Query 30163 CCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT 30222 | |||| || | | | || ||||| || ||| | |||| |||||| || Sbjct 961309 CTTGATCTTGTTGATAACCTCGGCCAATTGATCAACGCCCTTGCCCGTGTAGTCGGCGTG 961250 Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||||| |||||| || || || || || ||||| ||||| ||||| || || || || || Sbjct 961249 CATGTTCGTGTATTCGGCGCCAAAGTGTCTCCATTGGAAACCGTAAACGGGGCCGAGATC 961190 Query 30283 TCCCTCTTCCCTGTGCTCG---AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 30339 ||| | || | ||||| || || | ||||||| | |||| | |||||| | Sbjct 961189 ACCCACCTC---GCGCTCGGTCAACCCGATGGAGTCCAAATACTCTCGGCTTCCGTTGCC 961133 Query 30340 GTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 30399 ||||||||| || | | |||||| | | || || | || || || ||||| Sbjct 961132 GTCCCAGATGTTGATCTTCTTCTCTGCCAACTTGTTCGCATTGGTCTCGCCCGCCACGAA 961073 Query 30400 CCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 ||| | ||||||||| ||||| | ||| || || | ||||||||| | ||| || || Sbjct 961072 CCATAACAGCTCCTCGGCGACGCCTCGCCAGAAAACACGCTTGGTCGTCAAGAGCGGGAA 961013 Query 30460 C 30460 | Sbjct 961012 C 961012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310300961840