Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-16 seq8 91.5 9e-14 >seq7 Length=770246 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551 ||||||||||| ||||| ||| ||||||||| ||||| || || | || || || || Sbjct 134635 CGCAACACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCGGCGAGCGTGCGGCCG 134576 Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 || || ||||| ||||| || || || | ||| || || |||||||| | |||||||| Sbjct 134575 TCCTCGAGTTGCTTACCCGCGAAGATCAGACGTTGCTGATCCGGCGGGATCCCCTCCTTA 134516 Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670 ||| |||| || | || ||| | || ||||| | |||||| |||| ||| || Sbjct 134515 TCTTGGATC-TTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGAT 134457 Query 34671 CGTTTTACCGGT 34682 || ||||| || Sbjct 134456 GGTCTTACCCGT 134445 >seq8 Length=717457 Score = 91.5 bits (100), Expect = 9e-14 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551 ||||||||||| ||||| || ||||||||| ||||| ||||| | | || || || Sbjct 310636 CGCAACACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCCGCCAACGTGCGGCCG 310577 Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 || || || || || || || || || ||||| || || |||||||| | |||||||| Sbjct 310576 TCCTCGAGCTGCTTCCCCGCGAAAATCAAACGTTGCTGATCCGGCGGGATGCCCTCCTTA 310517 Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670 ||| |||| || | || ||| | || ||||| | |||||| |||| ||| || Sbjct 310516 TCTTGGATC-TTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGAT 310458 Query 34671 CGTTTTACCGGT 34682 || ||||| || Sbjct 310457 GGTCTTACCAGT 310446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729523284660