Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 2e-29
>seq1
Length=1096037
Score = 143 bits (158), Expect = 2e-29
Identities = 393/601 (65%), Gaps = 6/601 (1%)
Strand=Plus/Minus
Query 27129 GAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG 27188
||| || ||||||||||||| || || | ||| ||||| | |||||| |||
Sbjct 961609 GAGTTGCTTCTTCAGCGGTTCGACATGGTTTGAGTACACGTGCGTGTCTCCACAAACGTG 961550
Query 27189 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 27248
||| || || || || | || || || || || |||||| | ||||| || |||||
Sbjct 961549 GACGAAATCGCCAGGCTTGAGGTCGCACACTTGCGCGATCATGCAGGTGAGCAGGGAGTA 961490
Query 27249 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308
|||||||| || || || ||||| |||||||| | ||| | |||||| | || ||
Sbjct 961489 CGACGCGATGTTGAACGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACATTTGGCA 961430
Query 27309 CGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368
| || || | | ||||| ||||| || | ||||||||| || ||||||||
Sbjct 961429 GCTCAATTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGAGCCAT 961370
Query 27369 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428
| || || ||||| || | | |||||| | || || || ||
Sbjct 961369 TTCCTTTAGCGCTGCCGGATTCCATGCTGTAAGTAAGATGCGACGATCGGTCGGATTATT 961310
Query 27429 CCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCT 27488
| |||| || | | | || ||||| || ||| | |||| |||||| |
Sbjct 961309 CTTGATCTTGTTGATAACCTCGGCCAATTGATCAACGCCCTTGCCCGTGTAGTCGGCGTG 961250
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||||| |||||| || || || || || ||||||||||| ||||| || || || || ||
Sbjct 961249 CATGTTCGTGTATTCGGCGCCAAAGTGTCTCCATTGGAAACCGTAAACGGGGCCGAGATC 961190
Query 27549 TCCCTCTTCCCTGTGCTCG---AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 27605
||| | || | ||||| || || | ||||||| | |||| | |||||| |
Sbjct 961189 ACCCACCTC---GCGCTCGGTCAACCCGATGGAGTCCAAATACTCTCGGCTTCCGTTGCC 961133
Query 27606 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 27665
||||||||| || | | |||||| | | || || | || || || |||||
Sbjct 961132 GTCCCAGATGTTGATCTTCTTCTCTGCCAACTTGTTCGCATTGGTCTCGCCCGCCACGAA 961073
Query 27666 CCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725
||| | ||||||||| ||||| | ||| || || | ||||||||| | ||| || ||
Sbjct 961072 CCATAACAGCTCCTCGGCGACGCCTCGCCAGAAAACACGCTTGGTCGTCAAGAGCGGGAA 961013
Query 27726 C 27726
|
Sbjct 961012 C 961012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507109932620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |