Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 >seq1 Length=1096037 Score = 143 bits (158), Expect = 2e-29 Identities = 393/601 (65%), Gaps = 6/601 (1%) Strand=Plus/Minus Query 27129 GAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG 27188 ||| || ||||||||||||| || || | ||| ||||| | |||||| ||| Sbjct 961609 GAGTTGCTTCTTCAGCGGTTCGACATGGTTTGAGTACACGTGCGTGTCTCCACAAACGTG 961550 Query 27189 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 27248 ||| || || || || | || || || || || |||||| | ||||| || ||||| Sbjct 961549 GACGAAATCGCCAGGCTTGAGGTCGCACACTTGCGCGATCATGCAGGTGAGCAGGGAGTA 961490 Query 27249 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 |||||||| || || || ||||| |||||||| | ||| | |||||| | || || Sbjct 961489 CGACGCGATGTTGAACGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACATTTGGCA 961430 Query 27309 CGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 | || || | | ||||| ||||| || | ||||||||| || |||||||| Sbjct 961429 GCTCAATTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGAGCCAT 961370 Query 27369 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428 | || || ||||| || | | |||||| | || || || || Sbjct 961369 TTCCTTTAGCGCTGCCGGATTCCATGCTGTAAGTAAGATGCGACGATCGGTCGGATTATT 961310 Query 27429 CCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCT 27488 | |||| || | | | || ||||| || ||| | |||| |||||| | Sbjct 961309 CTTGATCTTGTTGATAACCTCGGCCAATTGATCAACGCCCTTGCCCGTGTAGTCGGCGTG 961250 Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||| |||||| || || || || || ||||||||||| ||||| || || || || || Sbjct 961249 CATGTTCGTGTATTCGGCGCCAAAGTGTCTCCATTGGAAACCGTAAACGGGGCCGAGATC 961190 Query 27549 TCCCTCTTCCCTGTGCTCG---AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 27605 ||| | || | ||||| || || | ||||||| | |||| | |||||| | Sbjct 961189 ACCCACCTC---GCGCTCGGTCAACCCGATGGAGTCCAAATACTCTCGGCTTCCGTTGCC 961133 Query 27606 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 27665 ||||||||| || | | |||||| | | || || | || || || ||||| Sbjct 961132 GTCCCAGATGTTGATCTTCTTCTCTGCCAACTTGTTCGCATTGGTCTCGCCCGCCACGAA 961073 Query 27666 CCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 ||| | ||||||||| ||||| | ||| || || | ||||||||| | ||| || || Sbjct 961072 CCATAACAGCTCCTCGGCGACGCCTCGCCAGAAAACACGCTTGGTCGTCAAGAGCGGGAA 961013 Query 27726 C 27726 | Sbjct 961012 C 961012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507109932620