Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq12 154 4e-32
seq7 122 2e-22
seq8 116 9e-21
>seq12
Length=542657
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || ||||| || || || || || ||||| ||||| ||| |||
Sbjct 189121 CAAATCTTCGTGAAGACGCTCACGGGCAAGACCATTACGCTCGAAGTGGAGTCCTCGGAC 189180
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || ||||| ||||| ||||| ||||| ||||||
Sbjct 189181 ACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAGCAA 189240
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || |||||||| || || | ||| | ||||| || ||| ||
Sbjct 189241 CGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAACATC 189300
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 189301 CAGAAGGAGTCCACGCTCCA-CTTG 189324
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || ||||| || || || || || ||||| ||||| ||| |||
Sbjct 189349 CAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCGGAC 189408
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || ||||| ||||| ||||| ||||| ||||||
Sbjct 189409 ACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAGCAA 189468
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || |||||||| || || | ||| | ||||| || ||| ||
Sbjct 189469 CGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAACATC 189528
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 189529 CAGAAGGAGTCCACGCTCCA-CTTG 189552
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || ||||| || || || || || ||||| ||||| ||| |||
Sbjct 189577 CAAATCTTCGTGAAGACGCTCACGGGTAAGACCATTACGCTCGAAGTGGAGTCCTCGGAC 189636
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || ||||| ||||| ||||| ||||| ||||||
Sbjct 189637 ACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCGCCGGATCAGCAA 189696
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || |||||||| || || | ||| | ||||| || ||| ||
Sbjct 189697 CGTTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGTCGCACTTTGGCCGACTACAACATC 189756
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 189757 CAGAAGGAGTCCACGCTCCA-CTTG 189780
Score = 96.9 bits (106), Expect = 8e-15
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| ||||| ||||| |||||||| ||||||||||| ||| |||
Sbjct 188544 CAGATCTTCGTCAAAACGCTCACGGGAAAGACGATCACGCTCGAGGTGGAGTCCTCGGAC 188603
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|| ||||| |||||||| |||||||||||||| || ||
Sbjct 188604 ACGATCGATAACGTCAAGGCGAAGATTCAGGACAAGGAGGG 188644
>seq7
Length=770246
Score = 122 bits (134), Expect = 2e-22
Identities = 138/184 (75%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||| | |||||||| ||| ||||||||||| ||||| ||
Sbjct 134445 ACGGGTAAGACCATCACCTTGGAGGTGGAGTCCTCGGACACCATCGACAACGTGAAGGCG 134504
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| || || || || || ||||| ||||| |||||||| || |||||||| || ||
Sbjct 134505 AAGATCCAAGATAAGGAGGGGATCCCGCCGGATCAGCAACGTCTGATCTTCGCGGGTAAG 134564
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| ||||| || || | || || ||||| || ||| ||||||| || || || || ||
Sbjct 134565 CAACTCGAGGACGGCCGCACGCTCGCCGACTACAACATCCAAAAGGAGTCCACGCTCCA- 134623
Query 178125 CTTG 178128
||||
Sbjct 134624 CTTG 134627
>seq8
Length=717457
Score = 116 bits (128), Expect = 9e-21
Identities = 147/201 (73%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987
|||||| ||| | | || || || || |||||| | |||||||| ||| |||||||
Sbjct 310429 TTTTCGCGAACGCAGTGACTGGTAAGACCATCACCTTGGAGGTGGAGTCCTCGGACACCA 310488
Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047
|||| ||||| || ||||| || || || || || ||||| ||||| ||||||||
Sbjct 310489 TCGACAACGTGAAGGCGAAGATCCAAGATAAGGAGGGCATCCCGCCGGATCAGCAACGTT 310548
Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107
| || ||||| || || |||||||| || || | || | || ||||| ||| ||||||
Sbjct 310549 TGATTTTCGCGGGGAAGCAGCTCGAGGACGGCCGCACGTTGGCGGATTACAACATCCAAA 310608
Query 178108 AAGAATCAACACTGCATCTTG 178128
| || || || || || ||||
Sbjct 310609 AGGAGTCTACGCTCCA-CTTG 310628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730891543880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |