Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq947 109 1e-18 >seq947 Length=48402 Score = 109 bits (120), Expect = 1e-18 Identities = 153/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || ||||| || || ||||| | || || | || ||| Sbjct 33474 AGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCT 33415 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||| || || || ||||| || || | ||| || ||||| || || || || || ||| Sbjct 33414 TCTAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 33355 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGT 104526 |||||||| || || ||||| || | || || | ||| || ||||| || || || || Sbjct 33354 TGAATCTTGGCCTTCACATTCTCAATAGTGTC-CGAGGACTCCACCTCCAGCGTGATGGT 33296 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCA 104558 ||| || || | || || ||||| ||||||| Sbjct 33295 CTTGCCGGTCAAGGTCTTCACAAAAATCTGCA 33264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151344539381908