Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq947 102 7e-17 >seq947 Length=48402 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||| |||| ||||| |||| ||||| ||||| || | ||| ||||| | Sbjct 33947 CCACCGCGCAAGCGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAATCAGCC 33888 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| |||||||||||| || || |||| || | | ||||| || || ||| Sbjct 33887 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGGGGA 33828 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || ||||| || ||| ||||| | || || Sbjct 33827 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGACTCCACC 33768 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| ||||||||| || ||||| | || |||||||| |||||||||| Sbjct 33767 TCAAGCGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAAATCTGCATGC 33719 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||| |||| ||||| ||||| || | ||| || ||| || ||| Sbjct 31721 CGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGCCCG 31662 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| ||||||| | | ||||| || || || || || || ||| Sbjct 31661 TCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTG 31602 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || ||| ||||| | | || || || | ||||||| Sbjct 31601 TCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATG 31542 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 || || || || || || |||||||||||||||| Sbjct 31541 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCA 31508 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||| ||| | ||||| ||||| || | ||| || ||| || ||| | Sbjct 32254 CGCAGCACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGCCCA 32195 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| ||||||| | | ||||| || || || || || || ||| Sbjct 32194 TCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTG 32135 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || | | ||||| | || || || | |||||| Sbjct 32134 TCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCTGACGACTCCACCTCCAGCGTGATC 32075 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || ||||| || || |||||||||||||| ||| Sbjct 32074 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGTATG 32039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448270741110360