Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2126 120 3e-22 >seq2126 Length=41412 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 ||||| ||| ||| ||||||| ||||||||||||||||| |||||||| |||||| Sbjct 20852 CACGGCGTGCGCAACTCGCTGCTGGTGGCCCCCATGCCCACCGCCTCCACCAGCCAGATC 20911 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || ||||||||||||| || || |||| |||||||||| | ||| | ||||||||| Sbjct 20912 CTGGGCAACAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACGTGCGCCGGGTGCTC 20971 Query 95197 GCCGGGGAATTCCCCG 95212 | ||||| ||| ||| Sbjct 20972 TCTGGGGAGTTCACCG 20987 Score = 114 bits (126), Expect = 1e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047 |||| || ||||| || || |||||| || | |||||| || |||||| | | Sbjct 17020 GACACGCTGAAGGAGTGCGCCTGCATCTCCAAGTCCGCGGGCGGCATCGGGCTGTCCATG 17079 Query 94048 CACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTC 94107 ||| || | || ||| || |||||||||||||| ||||| ||||||||||||||| || Sbjct 17080 CACAACATCCGCTCCACCGGCTCCTACATCCGCGGCACCAACGGCACCTCCAACGGCATC 17139 Query 94108 GTCCCTATGCTCCGGGTCTTCAACAACGCGG 94138 ||||| ||||| |||||||||||| || ||| Sbjct 17140 GTCCCCATGCTGCGGGTCTTCAACGACACGG 17170 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 94454 AGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCA 94513 |||||||| | | | |||| | |||||||||||||| | |||| ||| | | || Sbjct 18700 AGCTGTGGTTTGCGGTGATGGAGGCCCAGGTGGAGACGGGCAACCCCTTCATGCTCTACA 18759 Query 94514 AGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATC 94573 ||||||| |||| |||||||||||||||| |||| ||| |||||| |||| || | Sbjct 18760 AGGACTCGTGCAACCGCAAGTCCAACCAGCAGAACCTGGGGACCATCAAGTGCTCCAACC 18819 Query 94574 TGTGCAC 94580 | ||||| Sbjct 18820 TCTGCAC 18826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700622069960