Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq3544 684 0.0 seq3157 495 5e-135 >seq3544 Length=2542 Score = 684 bits (758), Expect = 0.0 Identities = 713/933 (76%), Gaps = 2/933 (0%) Strand=Plus/Plus Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853 || || |||||| |||| || | || ||| | || |||||||||||||||| | Sbjct 1611 TTTTGTGAGTGGATTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTTTTA 1670 Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912 ||||| || ||| | || | ||||| | |||| || || ||| ||| | || ||||| Sbjct 1671 ATGATTCCTACTTTATTAACAGCAACTA-CTGTATTTATTATTGGTTTTATTGCTGCACC 1729 Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972 |||||| ||||| || |||||||| || || ||| | ||||| | | || |||||||| Sbjct 1730 TCCTGTAGATATTGATGGTATCCGTGAGCCAGTATCAGGTTCTTTATTATACGGTAACAA 1789 Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032 ||| || |||||||| || | || | || || || |||||| | |||||||||||||| Sbjct 1790 CATTATTACTGGTGCTATTATTCCTACTTCAAATGCTATTGGTATGCACTTCTACCCAAT 1849 Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGT 182092 ||||||||||| ||| | || || ||| | |||||||||||||||| |||| | | || Sbjct 1850 TTGGGAAGCTGCTTCATTAGACGAATGGTTATATAACGGTGGTCCTTACCAATTAATCGT 1909 Query 182093 TTTCCACTTCCTGATCGGCATCTACGCCTACATGGGACGTGAGTGGGAACTTTCTTACCG 182152 || ||| || | ||||| || | ||| || ||||| ||||||||||||||||||| ||| Sbjct 1910 TTGCCATTTTATCATCGGTATTTGCGCTTATATGGGTCGTGAGTGGGAACTTTCTTTCCG 1969 Query 182153 CTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGC 182212 |||||||||||||| |||||| |||||| || || ||||| || ||||| || ||| Sbjct 1970 TTTAGGTATGCGTCCTTGGATCGCTGTAGCTTATTCAGCTCCTGTAGCTGCTGCTCTTGC 2029 Query 182213 TGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAAT 182272 ||||||| | | || ||| ||||||||||||| || || |||| ||||| | || || Sbjct 2030 TGTATTCGTTATTTACCCTATCGGTCAAGGTTCTTTTTCTGATGGTATGCCTTTAGGTAT 2089 Query 182273 CTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCC 182332 || || || ||||| | ||| | || |||||||| || || ||||| |||||||| || Sbjct 2090 TTCTGGTACTTTCAATTTCATGATTGTATTCCAAGCAGAACATAACATCCTTATGCACCC 2149 Query 182333 CTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGG 182392 ||||||||| | ||||| || |||||||| ||||||||| | ||| ||| ||||| || Sbjct 2150 ATTCCACATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTTTCTGCTATGCATGG 2209 Query 182393 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGG 182452 ||| || || || ||||| || | ||||| || ||||| | || || ||| ||| Sbjct 2210 TTCATTAGTAACTTCTTCTCTTATTCGTGAAACTACTGAAAACGAATCTGCTAACGCTGG 2269 Query 182453 TTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGG 182512 |||||| ||||||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct 2270 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGCTACTTCGG 2329 Query 182513 TCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGC 182572 |||||| || |||||||| || || || |||||||| ||||| || |||||||| | || Sbjct 2330 TCGTTTAATTTTCCAATATGCTTCTTTTAACAACTCTCGTTCATTACACTTCTTTTTAGC 2389 Query 182573 TGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAA 182632 ||| ||||||||||| | || |||||||| || | ||| | || || |||||||| || Sbjct 2390 TGCTTGGCCTGTTGTATGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTTAA 2449 Query 182633 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACAC 182692 | | ||||| |||||||||||||| || | | ||| || |||||||| ||||||| Sbjct 2450 CTTAAACGGCTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATTAACAC 2509 Query 182693 TTGGGCAGATGTATTGAACCGTGCTGGTCTTGG 182725 |||||| || | | ||||||||| ||||| Sbjct 2510 TTGGGCTGACATTATTAACCGTGCTAACCTTGG 2542 >seq3157 Length=2513 Score = 495 bits (548), Expect = 5e-135 Identities = 633/872 (73%), Gaps = 0/872 (0%) Strand=Plus/Plus Query 183175 GGGTGGTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGG 183234 || ||||| || | |||| || ||| | || || |||||||| || || || ||| Sbjct 1634 GGTTGGTTTGACATTGTTGACGATTGGCTACGTCGTGACCGCTTTGTATTCGTAGGGTGG 1693 Query 183235 TCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACA 183294 ||||| | ||||| | || |||||||||||||| |||| | ||| |||| || || Sbjct 1694 TCTGGGTTATTACTTTTCCCTACTGCTTATCTTGCAGTTGGTGCATGGTTTACAGGAACT 1753 Query 183295 GCTTTTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAAC 183354 | ||||| || ||||||||| |||||| | ||| || ||| | |||||| || Sbjct 1754 ACATTTGTAACATCTTGGTATACTCATGGATTAGCTAGCTCATATTTAGAAGGTTGCAAT 1813 Query 183355 TTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTT 183414 ||| | || || || || || || || ||| | ||||||||||||| | | || ||| Sbjct 1814 TTTTTAACTGCGGCAGTTTCTACACCAGCTAATAGTATGGGTCATTCTTTATTATTCCTT 1873 Query 183415 TGGGGTCCTGAGTCTCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAAT 183474 ||||||||||| | ||||| || ||| || ||||| ||| | || || || ||| | Sbjct 1874 TGGGGTCCTGAAGCACAAGGTGATTTTACTCGTTGGTGTCAATTAGGCGGCCTTTGGGCT 1933 Query 183475 TTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTT 183534 ||| ||||| || ||| | |||| ||| |||||||| |||||||| || |||||| || Sbjct 1934 TTTACAGCACTTCATGGTTCGTTTGGTCTTATTGGTTTTATGCTTCGTCAATTTGAAATT 1993 Query 183535 GCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTT 183594 || || | | || |||||||| || || |||||||| || | || |||||| || Sbjct 1994 GCACGTTCAGTAAAAATTCGTCCTTATAACGCAATTGCGTTTTCAGCGCCAATTGCTCTT 2053 Query 183595 TTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGT 183654 ||||| ||| ||| | || || ||| | ||||| ||| ||||| |||||||||||| Sbjct 2054 TTTGTTTCTGTTTTCTTAATTTACCCATTAGGTCAATCTGGTTGGTTTTTTGCACCTAGT 2113 Query 183655 TTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACG 183714 || || || ||||| || || | ||| | || || | || ||||| || |||||||| Sbjct 2114 TTTGGTGTTGCAGCGATATTCCGTTTCATTTTATTTTTCCAAGGTTTTCATAACTGGACA 2173 Query 183715 TTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCT 183774 ||||| || || ||||||||||| ||||||||| | |||| || ||||| || ||| Sbjct 2174 TTAAATCCATTTCATATGATGGGTGTTGCTGGTGTTTTAGGTGGCGCACTTCTTTCTGCA 2233 Query 183775 ATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTC 183834 || ||||||| |||||||| ||||| | | |||||||||||| || || || ||| Sbjct 2234 ATTCATGGTGCAACAGTAGAAAATACTCTTTTTGAAGATGGAGATGGTGCTAATACTTTC 2293 Query 183835 AAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTC 183894 || ||| | | || |||| |||||| || |||||| | || ||||| |||||||| Sbjct 2294 CGTGCTTTTAACCCAACACAAGCAGAAGAAACCTATTCTTTTGTAACAGCAAATCGTTTT 2353 Query 183895 TGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTG 183954 ||||| ||||| || || || || ||| ||||| |||||||| ||||||||||||||| Sbjct 2354 TGGTCTCAAATTTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGTTG 2413 Query 183955 TTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAAT 184014 || ||||| || | ||||||||| | | ||||||| | |||| | || | ||| Sbjct 2414 TTCGTTCCAGTAACTGGTCTTTGGATGAGTGCTATTGGTGTAGTTGGTTTAGCATTAAAT 2473 Query 184015 CTTCGTGCTTATGATTTTGTAAGTCAAGAGAT 184046 | ||||| |||||||| ||| ||||| || Sbjct 2474 TTACGTGCATATGATTTCGTATCACAAGAAAT 2505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611668083723800