Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq3544 616 2e-171 >seq3544 Length=2542 Score = 616 bits (682), Expect = 2e-171 Identities = 701/941 (74%), Gaps = 0/941 (0%) Strand=Plus/Plus Query 169681 TGGCCTCAGTTTACTGATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTC 169740 ||| ||| ||| ||| ||| | || ||||| | ||||| | || | |||||||| Sbjct 1602 TGGGCTCGTTTTTGTGAGTGGATTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTT 1661 Query 169741 GGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATC 169800 ||||| || ||||| || | ||||| ||||| | || ||||| ||| ||| || Sbjct 1662 GGTGTTTTAATGATTCCTACTTTATTAACAGCAACTACTGTATTTATTATTGGTTTTATT 1721 Query 169801 GCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTAT 169860 || || || ||||| || || ||||| ||| | || || ||| ||||||| || | || Sbjct 1722 GCTGCACCTCCTGTAGATATTGATGGTATCCGTGAGCCAGTATCAGGTTCTTTATTATAC 1781 Query 169861 GGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTC 169920 ||||||||||| || ||||||| || |||| ||||||| || || ||| | |||||| Sbjct 1782 GGTAACAACATTATTACTGGTGCTATTATTCCTACTTCAAATGCTATTGGTATGCACTTC 1841 Query 169921 TATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAA 169980 || || ||||||||||| || | |||| || ||||| ||||||||||||||||| ||| Sbjct 1842 TACCCAATTTGGGAAGCTGCTTCATTAGACGAATGGTTATATAACGGTGGTCCTTACCAA 1901 Query 169981 TTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTA 170040 ||| | | | ||| || | ||||| || | || || |||||| | |||||||||| Sbjct 1902 TTAATCGTTTGCCATTTTATCATCGGTATTTGCGCTTATATGGGTCGTGAGTGGGAACTT 1961 Query 170041 TCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCA 170100 || | ||||||||||||||||||||||||| |||||| ||||| ||||| || | || Sbjct 1962 TCTTTCCGTTTAGGTATGCGTCCTTGGATCGCTGTAGCTTATTCAGCTCCTGTAGCTGCT 2021 Query 170101 GCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCT 170160 || | ||||||||| | | || ||| ||||||| || ||||| || || || |||||| Sbjct 2022 GCTCTTGCTGTATTCGTTATTTACCCTATCGGTCAAGGTTCTTTTTCTGATGGTATGCCT 2081 Query 170161 CTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTT 170220 ||||||| || ||||| || || |||||| | |||||||||||||| || ||||| ||| Sbjct 2082 TTAGGTATTTCTGGTACTTTCAATTTCATGATTGTATTCCAAGCAGAACATAACATCCTT 2141 Query 170221 ATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCA 170280 |||||||||||||| ||| || ||||||||| | || || || || | || || || Sbjct 2142 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTTTCTGCT 2201 Query 170281 ATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAG 170340 ||||| |||||| | ||||| |||||||| || | || || || || ||||| || Sbjct 2202 ATGCATGGTTCATTAGTAACTTCTTCTCTTATTCGTGAAACTACTGAAAACGAATCTGCT 2261 Query 170341 AACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGA 170400 ||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| || || Sbjct 2262 AACGCTGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGC 2321 Query 170401 TACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTC 170460 ||||| ||| | | || |||||||||||| |||||||| |||| | |||||| Sbjct 2322 TACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTTAACAACTCTCGTTCATTACACTTC 2381 Query 170461 TTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATG 170520 || | ||| | | ||||| ||||| || ||||| ||| | | ||||||| || ||| Sbjct 2382 TTTTTAGCTGCTTGGCCTGTTGTATGTATTTGGTTCACTGCTTTAGGTATTTCAACTATG 2441 Query 170521 GCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTA 170580 ||||||||| | || || || ||||||||||| ||| | |||||| | ||| ||| Sbjct 2442 GCATTTAACTTAAACGGCTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTA 2501 Query 170581 GTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGG 170621 || || ||||| ||| || ||||| | || ||||| || Sbjct 2502 ATTAACACTTGGGCTGACATTATTAACCGTGCTAACCTTGG 2542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582821400274400