Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq947 93.3 3e-14 >seq947 Length=48402 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || |||||||| || |||||||| Sbjct 31697 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCAAAG 31638 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| || || || Sbjct 31637 ATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCAC--AT 31580 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | || || ||| || || | || ||||| || || || || ||||||| Sbjct 31579 TCTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTCA 31520 Query 34969 CAAAGATCTGCA 34980 |||||||||||| Sbjct 31519 CAAAGATCTGCA 31508 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| || ||||| || |||||||| Sbjct 33453 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAG 33394 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || || || Sbjct 33393 ATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTCAC--AT 33336 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | || || ||| || || | || ||||| || || || | ||||||| Sbjct 33335 TCTCAATAGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTGCCGGTCAAGGTCTTCA 33276 Query 34969 CAAAGATCTGCA 34980 |||| ||||||| Sbjct 33275 CAAAAATCTGCA 33264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324619154920728