Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq3544 453 3e-123 >seq3544 Length=2542 Score = 453 bits (502), Expect = 3e-123 Identities = 664/934 (71%), Gaps = 4/934 (0%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||||||||| |||| || ||||| |||||| | || | || ||||| || || | Sbjct 1611 TTTTGTGAGTGGATTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTTTTA 1670 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || ||| | |||| ||||| ||| ||||| ||| || || || ||||| Sbjct 1671 ATGATTCCTACTTTATTAACAGCAACTAC-TGTATTTATTATTGGTTTTATTGCTGCACC 1729 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 ||||||||||| ||||| || ||||||||||| || || || ||| | ||||| ||||| Sbjct 1730 TCCTGTAGATATTGATGGTATCCGTGAGCCAGTATCAGGTTCTTTATTATACGGTAACAA 1789 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 || || | || || | | || | || || || || || | || || ||||| || Sbjct 1790 CATTATTACTGGTGCTATTATTCCTACTTCAAATGCTATTGGTATGCACTTCTACCCAAT 1849 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 |||||||||| || | ||||| ||| |||| || || || || || ||| | || | Sbjct 1850 TTGGGAAGCTGCTTCATTAGACGAATGGTTATATAACGGTGGTCCTTACCAATTAATCGT 1909 Query 26101 CTTCCACTTCTTAATAGG-AGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACA 26159 | ||| || | || || | | || || ||| || | |||||||||| |||| | Sbjct 1910 TTGCCATTTTATCATCGGTATTTGC-GCTTATATGGGTCGTGAGTGGGAACTTTCTTTCC 1968 Query 26160 GACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCG 26219 | |||| ||| | || ||||| ||| || ||| |||| || || | || ||||| | Sbjct 1969 GTTTAGGTATGCGTCCTTGGATCGCTGTAGCTTATTCAGCTCCTGTAGCTGCTGCTCTTG 2028 Query 26220 CAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTA 26279 | || ||| | |||| ||| |||| ||||| |||| |||||| |||||| | |||| Sbjct 2029 CTGTATTCGTTATTTACCCTATCGGTCAAGGTTCTTTTTCTGATGGTATGCCTTTAGGTA 2088 Query 26280 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACC 26339 | ||||||||||| || || ||| | |||||||||||||||||||| || || ||||||| Sbjct 2089 TTTCTGGTACTTTCAATTTCATGATTGTATTCCAAGCAGAACATAACATCCTTATGCACC 2148 Query 26340 CATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACG 26399 ||||||| ||| |||||||||||| || || ||||| | | || |||||||||| | Sbjct 2149 CATTCCACATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTTTCTGCTATGCATG 2208 Query 26400 GAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATG 26459 | || || ||||| || |||||| ||||| || || | | || || || Sbjct 2209 GTTCATTAGTAACTTCTTCTCTTATTCGTGAAACTACTGAAAACGAATCTGCTAACGCTG 2268 Query 26460 GCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 26519 | || || || || ||||| ||||| || || || || || || || ||||| ||||| | Sbjct 2269 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGCTACTTCG 2328 Query 26520 GGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579 | | |||||||| || ||||| |||||| ||| ||||| | || |||||| | | Sbjct 2329 GTCGTTTAATTTTCCAATATGCTTCTTTTAACAACTCTCGTTCATTACACTTCTTTTTAG 2388 Query 26580 CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTA 26639 || ||||||| ||||| | || ||| | || || | ||||| | || |||||||||| Sbjct 2389 CTGCTTGGCCTGTTGTATGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTTA 2448 Query 26640 ACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTA 26699 || |||| || || ||||| ||||| ||||| |||||| | || |||| | Sbjct 2449 ACTTAAACGGCTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATTAACA 2508 Query 26700 CATGGGCTGATGTATTAAACCGAGCTAACCTCGG 26733 | |||||||| | | ||||| |||||||| || Sbjct 2509 CTTGGGCTGACATTATTAACCGTGCTAACCTTGG 2542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146720038585224