Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq3544 596 4e-166 >seq3544 Length=2542 Score = 596 bits (660), Expect = 4e-166 Identities = 687/925 (74%), Gaps = 0/925 (0%) Strand=Plus/Minus Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||||| ||||||||||||||| | || | || | ||||| || ||||| Sbjct 2533 GCACGGTTAATAATGTCAGCCCAAGTGTTAATTACACGACCTTGTGAATCTACAACTGAT 2474 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || |||||||| |||||||| | ||||| |||||||| || | || | ||| || | | Sbjct 2473 TGGTTGAAGTTGAAGCCGTTTAAGTTAAATGCCATAGTTGAAATACCTAAAGCAGTGAAC 2414 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || || || ||||||||||| | ||||| ||||| ||| || ||||| Sbjct 2413 CAAATACATACAACAGGCCAAGCAGCTAAAAAGAAGTGTAATGAACGAGAGTTGTTAAAA 2354 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||| ||||| || | | || |||||||| ||||| ||||| ||||| || || Sbjct 2353 GAAGCATATTGGAAAATTAAACGACCGAAGTAGCCGTGAGCTGCAACGATGTTGTAAGTT 2294 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||||||||| |||||||| || ||| ||| |||||| |||| ||||||||| Sbjct 2293 TCTTCTTCTTGACCGAATTTGTAACCAGCGTTAGCAGATTCGTTTTCAGTAGTTTCACGA 2234 Query 25813 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 25872 ||||| || ||||| || | || |||||||||| ||||| | ||||| ||||| Sbjct 2233 ATAAGAGAAGAAGTTACTAATGAACCATGCATAGCAGAAAATAATGAACCACCAAATACA 2174 Query 25873 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 25932 || |||||||| ||||| ||||| || ||||||||||| || |||||||| || || ||| Sbjct 2173 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTATGTTCTGCTTGGAATACA 2114 Query 25933 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 25992 | ||| ||||||||||| || |||||||| | ||||||||||||||| ||| ||||| Sbjct 2113 ATCATGAAATTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGAAAAAGAACCTTGA 2054 Query 25993 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 26052 || | |||||| | | ||||||||||| || || || ||||| ||||||||||||||| Sbjct 2053 CCGATAGGGTAAATAACGAATACAGCAAGAGCAGCAGCTACAGGAGCTGAATAAGCTACA 1994 Query 26053 CATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 26112 ||||| || | ||| |||| | || ||||||||| | || |||| ||||| Sbjct 1993 GCGATCCAAGGACGCATACCTAAACGGAAAGAAAGTTCCCACTCACGACCCATATAAGCG 1934 Query 26113 GAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCAC 26172 | || ||||||| ||| ||| | || || | ||| || || ||||||||||| ||||| Sbjct 1933 CAAATACCGATGATAAAATGGCAAACGATTAATTGGTAAGGACCACCGTTATATAACCAT 1874 Query 26173 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC 26232 ||||| | | ||||||||||| |||||||||||||| | ||| || || || || | Sbjct 1873 TCGTCTAATGAAGCAGCTTCCCAAATTGGGTAGAAGTGCATACCAATAGCATTTGAAGTA 1814 Query 26233 GGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 26292 || | || || || | || |||||||| || || | ||| | ||||| || |||||| Sbjct 1813 GGAATAATAGCACCAGTAATAATGTTGTTACCGTATAATAAAGAACCTGATACTGGCTCA 1754 Query 26293 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 26352 || |||||||| ||||| || ||||| ||||||| ||| |||| | |||| | || | Sbjct 1753 CGGATACCATCAATATCTACAGGAGGTGCAGCAATAAAACCAATAATAAATACAGTAGTT 1694 Query 26353 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 26412 |||||||| | | ||| ||||||| || |||||||| || | || | ||||| | Sbjct 1693 GCTGTTAATAAAGTAGGAATCATTAAAACACCAAACCAACCGATGTATAAACGGTTTTCA 1634 Query 26413 GTACTTGTAACCCAGTCACATAAAC 26437 || || |||| ||| ||||| |||| Sbjct 1633 GTGCTAGTAATCCACTCACAAAAAC 1609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151987010222476