Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq3544 610 8e-170 >seq3544 Length=2542 Score = 610 bits (676), Expect = 8e-170 Identities = 661/876 (75%), Gaps = 0/876 (0%) Strand=Plus/Minus Query 7998 ATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACC 8057 ||| |||||||||||||| ||||| || ||||| | |||||||||||| || ||||||| Sbjct 2486 ATCTACAACTGATTGGTTGAAGTTGAAGCCGTTTAAGTTAAATGCCATAGTTGAAATACC 2427 Query 8058 CATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCT 8117 | || ||| ||||||| ||||||||| || | | ||| | |||||||| | | Sbjct 2426 TAAAGCAGTGAACCAAATACATACAACAGGCCAAGCAGCTAAAAAGAAGTGTAATGAACG 2367 Query 8118 ACTGTTGTTAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAAC 8177 | ||||||||| || ||||| ||||| ||||| | ||| ||||| || ||||| ||||| Sbjct 2366 AGAGTTGTTAAAAGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCGTGAGCTGCAAC 2307 Query 8178 AATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTC 8237 || || || || |||||||||||||| || || |||||| ||| ||| || | ||| Sbjct 2306 GATGTTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCAGCGTTAGCAGATTCGTTTTC 2247 Query 8238 AGTTGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGA 8297 ||| || || | || |||||||| || ||||| ||||| ||||||||| || | ||| Sbjct 2246 AGTAGTTTCACGAATAAGAGAAGAAGTTACTAATGAACCATGCATAGCAGAAAATAATGA 2187 Query 8298 TCCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTC 8357 ||||| || | ||| || || || ||| ||||| || |||||||| |||||||| || Sbjct 2186 ACCACCAAATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTATGTTC 2127 Query 8358 TGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGA 8417 |||||||||||| | |||||| || || |||||||||||||||| |||||| |||||||| Sbjct 2126 TGCTTGGAATACAATCATGAAATTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGA 2067 Query 8418 GAATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGC 8477 || ||||| ||||| | || || | | ||| || || | |||||||| ||| ||||| Sbjct 2066 AAAAGAACCTTGACCGATAGGGTAAATAACGAATACAGCAAGAGCAGCAGCTACAGGAGC 2007 Query 8478 ACTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCT 8537 ||| |||||| |||||| || | ||||||||| ||| | || | ||||||| | Sbjct 2006 TGAATAAGCTACAGCGATCCAAGGACGCATACCTAAACGGAAAGAAAGTTCCCACTCACG 1947 Query 8538 ACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCC 8597 |||||| ||||| |||| || || | || ||| | | | || || || ||||| || Sbjct 1946 ACCCATATAAGCGCAAATACCGATGATAAAATGGCAAACGATTAATTGGTAAGGACCACC 1887 Query 8598 GTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAAT 8657 |||||| ||||| || ||||||| |||||||||||||| || |||||||| | ||||| Sbjct 1886 GTTATATAACCATTCGTCTAATGAAGCAGCTTCCCAAATTGGGTAGAAGTGCATACCAAT 1827 Query 8658 AGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACC 8717 ||| || |||| |||| | |||||||| || |||||||| || || | || ||||| Sbjct 1826 AGCATTTGAAGTAGGAATAATAGCACCAGTAATAATGTTGTTACCGTATAATAAAGAACC 1767 Query 8718 TGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGAT 8777 || || || ||||| ||||| || ||||| ||||| || ||||||||||| | | || Sbjct 1766 TGATACTGGCTCACGGATACCATCAATATCTACAGGAGGTGCAGCAATAAAACCAATAAT 1707 Query 8778 AAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATA 8837 ||| ||||| || | ||| || ||||||||||| ||| ||||||||||||| || Sbjct 1706 AAATACAGTAGTTGCTGTTAATAAAGTAGGAATCATTAAAACACCAAACCAACCGATGTA 1647 Query 8838 AAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 | | ||| | || || |||| |||||| ||||| Sbjct 1646 TAAACGGTTTTCAGTGCTAGTAATCCACTCACAAAA 1611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615834293579720