Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq3544 672 0.0 >seq3544 Length=2542 Score = 672 bits (744), Expect = 0.0 Identities = 695/910 (76%), Gaps = 0/910 (0%) Strand=Plus/Plus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || |||||||||| |||||| | ||||| ||| | | | | Sbjct 1633 CTGAAAACCGTTTATACATCGGTTGGTTTGGTGTTTTAATGATTCCTACTTTATTAACAG 1692 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | |||| || ||| | | || |||||||||||||||||||| ||||||||||| | Sbjct 1693 CAACTACTGTATTTATTATTGGTTTTATTGCTGCACCTCCTGTAGATATTGATGGTATCC 1752 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 |||| || || | ||||||||| | || ||||||||||| || |||||||| || | | Sbjct 1753 GTGAGCCAGTATCAGGTTCTTTATTATACGGTAACAACATTATTACTGGTGCTATTATTC 1812 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| |||||| || |||||| | |||||||| || ||||||||||| || | | || | Sbjct 1813 CTACTTCAAATGCTATTGGTATGCACTTCTACCCAATTTGGGAAGCTGCTTCATTAGACG 1872 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| || || |||||||||| |||| | | || | ||| || | ||||| || Sbjct 1873 AATGGTTATATAACGGTGGTCCTTACCAATTAATCGTTTGCCATTTTATCATCGGTATTT 1932 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 || || |||||| ||||||||||||||| |||| | || ||||||||||||||| Sbjct 1933 GCGCTTATATGGGTCGTGAGTGGGAACTTTCTTTCCGTTTAGGTATGCGTCCTTGGATCG 1992 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 ||| || || || || || ||| ||||||| | ||||||||| || |||| ||| ||| Sbjct 1993 CTGTAGCTTATTCAGCTCCTGTAGCTGCTGCTCTTGCTGTATTCGTTATTTACCCTATCG 2052 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||||||||| ||||||| |||||| | ||||| ||||||||||| || | ||| Sbjct 2053 GTCAAGGTTCTTTTTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAATTTCATGA 2112 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || |||||||||||||| || |||||||||||||| |||||||||||||| || || | Sbjct 2113 TTGTATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTG 2172 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| || ||||| || | || ||||||||||| |||||||| || || ||||| || | Sbjct 2173 GTGTATTTGGTGGTTCATTATTTTCTGCTATGCATGGTTCATTAGTAACTTCTTCTCTTA 2232 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 | |||||||||||||| | || ||| ||| ||||||||| ||||| |||||||||| Sbjct 2233 TTCGTGAAACTACTGAAAACGAATCTGCTAACGCTGGTTACAAATTCGGTCAAGAAGAAG 2292 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 ||||||| ||||| ||||| ||||| || |||||||||||| | || ||||| ||||| | Sbjct 2293 AAACTTACAACATCGTTGCAGCTCACGGCTACTTCGGTCGTTTAATTTTCCAATATGCTT 2352 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 | || |||||||| | | |||||||| | ||||| |||||||| || || || | Sbjct 2353 CTTTTAACAACTCTCGTTCATTACACTTCTTTTTAGCTGCTTGGCCTGTTGTATGTATTT 2412 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || |||||| | ||| | ||||| |||||||| ||| | ||||| ||||||||||||| Sbjct 2413 GGTTCACTGCTTTAGGTATTTCAACTATGGCATTTAACTTAAACGGCTTCAACTTCAACC 2472 Query 155831 AGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCG 155890 | || || ||||| | ||| || || || ||||| |||||| ||||||| | Sbjct 2473 AATCAGTTGTAGATTCACAAGGTCGTGTAATTAACACTTGGGCTGACATTATTAACCGTG 2532 Query 155891 CTGGTCTTGG 155900 || ||||| Sbjct 2533 CTAACCTTGG 2542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584808509583560