Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq3544 670 0.0 >seq3544 Length=2542 Score = 670 bits (742), Expect = 0.0 Identities = 674/876 (77%), Gaps = 0/876 (0%) Strand=Plus/Minus Query 67427 GTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTT 67486 ||||| ||||| |||||||| ||| || ||| || || || || |||||||| Sbjct 2528 GTTAATAATGTCAGCCCAAGTGTTAATTACACGACCTTGTGAATCTACAACTGATTGGTT 2469 Query 67487 GAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGAT 67546 ||||||||| ||||| | ||| |||||||||||||| | ||| | ||||||||||| || Sbjct 2468 GAAGTTGAAGCCGTTTAAGTTAAATGCCATAGTTGAAATACCTAAAGCAGTGAACCAAAT 2409 Query 67547 GCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGC 67606 || || ||||| | ||||| | |||||||| | | |||||||| ||||| || Sbjct 2408 ACATACAACAGGCCAAGCAGCTAAAAAGAAGTGTAATGAACGAGAGTTGTTAAAAGAAGC 2349 Query 67607 ATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTC 67666 ||| ||||| || || ||||||||||| || ||||| ||||| ||||||||||| ||||| Sbjct 2348 ATATTGGAAAATTAAACGACCGAAGTAGCCGTGAGCTGCAACGATGTTGTAAGTTTCTTC 2289 Query 67667 TTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAG 67726 |||||| ||||| |||||||| ||| || || | ||||||||||| | ||||| Sbjct 2288 TTCTTGACCGAATTTGTAACCAGCGTTAGCAGATTCGTTTTCAGTAGTTTCACGAATAAG 2229 Query 67727 AGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGC 67786 ||||||||| || | ||||| ||||||||| ||| | ||||||||| |||||||| || Sbjct 2228 AGAAGAAGTTACTAATGAACCATGCATAGCAGAAAATAATGAACCACCAAATACACCAGC 2169 Query 67787 TACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACAT 67846 || |||||||| ||||||||||||||||||||||| || ||||||||||| || | ||| Sbjct 2168 AACACCAAGCATGTGGAATGGGTGCATAAGGATGTTATGTTCTGCTTGGAATACAATCAT 2109 Query 67847 GTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAA 67906 | | || ||||||||||||||||| | |||||| | ||||| |||||||||||||||| Sbjct 2108 GAAATTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGAAAAAGAACCTTGACCGAT 2049 Query 67907 AGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGAT 67966 ||| || | | ||| ||||| | || |||| || ||||| || || |||||| ||| Sbjct 2048 AGGGTAAATAACGAATACAGCAAGAGCAGCAGCTACAGGAGCTGAATAAGCTACAGCGAT 1989 Query 67967 CCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCTGTGAT 68026 ||||||||||||||| | |||| ||||||||||||||| |||||| || || || Sbjct 1988 CCAAGGACGCATACCTAAACGGAAAGAAAGTTCCCACTCACGACCCATATAAGCGCAAAT 1929 Query 68027 TCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATC 68086 ||||| | || ||| | || | | |||| |||| ||||| ||||| ||||| || || Sbjct 1928 ACCGATGATAAAATGGCAAACGATTAATTGGTAAGGACCACCGTTATATAACCATTCGTC 1869 Query 68087 TAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAAC 68146 || | || |||||||| || || |||||||| | ||| || || |||||| |||||| Sbjct 1868 TAATGAAGCAGCTTCCCAAATTGGGTAGAAGTGCATACCAATAGCATTTGAAGTAGGAAT 1809 Query 68147 AACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGAT 68206 || |||||||| ||| |||||||||||||| | | ||||||| || || || | ||| Sbjct 1808 AATAGCACCAGTAATAATGTTGTTACCGTATAATAAAGAACCTGATACTGGCTCACGGAT 1749 Query 68207 ACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCTGCTGC 68266 |||||| ||||| || |||||||| ||||| || |||| || || ||| | ||||| Sbjct 1748 ACCATCAATATCTACAGGAGGTGCAGCAATAAAACCAATAATAAATACAGTAGTTGCTGT 1689 Query 68267 GAGCAAGCAAGGAATCATCAACACACCGAACCAACC 68302 | || ||||||||| || ||||| |||||||| Sbjct 1688 TAATAAAGTAGGAATCATTAAAACACCAAACCAACC 1653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566921325947160