Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq3544 547 2e-151 >seq3544 Length=2542 Score = 547 bits (606), Expect = 2e-151 Identities = 671/908 (74%), Gaps = 6/908 (1%) Strand=Plus/Plus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 |||||| | || | || |||||||| | |||||||| | | | |||| || Sbjct 1638 AACCGTTTATACATCGGTTGGTTTGGTGTTTTAATGATTCCTACTTTATTAACAGCAACT 1697 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 | ||| || ||||||| || ||||| || || || || || |||||||| ||||| || Sbjct 1698 A-CTGTATTTATTATTGGTTTTATTGCTGCACCTCCTGTAGATATTGATGGTATCCGTGA 1756 Query 19651 ACCCGTATCCGGTAGCCTTCTT-TATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA 19709 || ||||| ||| | || || || || |||||||| || | || || | |||| | Sbjct 1757 GCCAGTATCAGGTT-CTTTATTATACGGTAACAACATTATTACTGGTGCTATTATTCCTA 1815 Query 19710 GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAAT 19769 ||||| || || | |||||||||||||||||||||||| |||| | || |||| Sbjct 1816 CTTCAAATGCTATTGGTATGCACTTCTACCCAATTTGGGAAGCTGCTTCATTAGACGAAT 1875 Query 19770 GGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATG 19829 || | || ||||| || || | |||| | | || | ||| || |||| || || | | Sbjct 1876 GGTTATATAACGGTGGTCCTTACCAATTAATCGTTTGCCATTTTATCATCGGTATTTGCG 1935 Query 19830 CTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTG 19889 |||| ||||| || |||||||||||| | || |||| ||| | |||||||| || Sbjct 1936 CTTATATGGGTCGTGAGTGGGAACTTTCTTTCCGTTTAGGTATGCGTCCTTGGATCGCTG 1995 Query 19890 TTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGTC 19949 | || || || ||||| || || || || ||| || || | | ||||| | |||| Sbjct 1996 TAGCTTATTCAGCTCCTGTAGCTGCTGCTCTTGCTGTATTCGTTATTTACCCTATCGGTC 2055 Query 19950 AGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGG 20009 | ||| || || |||| ||||||||| ||||| || ||||| ||||| | |||| | | Sbjct 2056 AAGGTTCTTTTTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAATTTCATGATTG 2115 Query 20010 TATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTG 20069 |||||||||| ||||||||||| || |||||||| ||||||||||||||||| ||||||| Sbjct 2116 TATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTG 2175 Query 20070 TATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC 20129 |||| ||||| ||| |||| ||| ||||| ||||| | || || || || ||| | | Sbjct 2176 TATTTGGTGGTTCATTATTTTCTGCTATGCATGGTTCATTAGTAACTTCTTCTCTTATTC 2235 Query 20130 GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGA 20189 |||| ||||||||| | ||| | ||| ||||||||| || || ||||||||||| | Sbjct 2236 GTGAAACTACTGAAAACGAATCTGCTAACGCTGGTTACAAATTCGGTCAAGAAGAAGAAA 2295 Query 20190 CCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTT 20249 | || |||||||| || ||||| || ||||| || ||||| || |||||||| ||||||| Sbjct 2296 CTTACAACATCGTTGCAGCTCACGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTT 2355 Query 20250 TCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGT 20309 | ||||| ||||| |||||||||| | ||||| ||||| || ||| | ||||||| Sbjct 2356 TTAACAACTCTCGTTCATTACACTTCTTTTTAGCTGCTTGGCCTGTTGTATGTATTTGGT 2415 Query 20310 TCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGT 20369 || |||| || || |||| || ||||| ||||| | ||||| |||||||| ||||| | Sbjct 2416 TCACTGCTTTAGGTATTTCAACTATGGCATTTAACTTAAACGGCTTCAACTTCAACCAAT 2475 Query 20370 CCCTTCTCGA-CAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCT 20428 | || | || |||| |||||||| ||| | ||||||||||||||| | || |||||| Sbjct 2476 CAGTTGTAGATTCACAA-GGTCGTGTAATTAACACTTGGGCTGACATTATTAACCGTGCT 2534 Query 20429 AATCTCGG 20436 || || || Sbjct 2535 AACCTTGG 2542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148822347434358