Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq3544 603 3e-168 >seq3544 Length=2542 Score = 603 bits (668), Expect = 3e-168 Identities = 706/948 (74%), Gaps = 7/948 (1%) Strand=Plus/Plus Query 18712 CCTTGGGACTC-TTTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTG 18770 |||| || ||| ||||||||| ||| | || || || || |||||| | || ||||| || Sbjct 1598 CCTTTGGGCTCGTTTTTGTGAGTGGATTACTAGCACTGAAAACCGTTTATACATCGGTTG 1657 Query 18771 GTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCTACTATTTGTTTCATTATTGCCTT 18830 |||||| | |||||||| | | | |||| |||| | || ||||||| || Sbjct 1658 GTTTGGTGTTTTAATGATTCCTACTTTATTAACAGCAACTACTGTATTTATTATTGGTTT 1717 Query 18831 CATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCT 18890 |||||||||||||||||||| |||||||| ||||| ||||| || |||| |||| Sbjct 1718 TATTGCTGCACCTCCTGTAGATATTGATGGTATCCGTGAGCCAGTATCAGG--TTCTTTA 1775 Query 18891 TTAT--GGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTA 18948 |||| || |||||||| || | || || | |||| | ||||| || || | Sbjct 1776 TTATACGGTAACAACATTATTACTGGTGCTATTATTCCTACTTCAAATGCTATTGGTATG 1835 Query 18949 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 19008 |||||||||||||||||||||||| |||| | || |||||| | || ||||| || || Sbjct 1836 CACTTCTACCCAATTTGGGAAGCTGCTTCATTAGACGAATGGTTATATAACGGTGGTCCT 1895 Query 19009 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGG 19068 | |||| | | || | ||| || |||| || | | ||||| ||||| || |||||| Sbjct 1896 TACCAATTAATCGTTTGCCATTTTATCATCGGTATTTGCGCTTATATGGGTCGTGAGTGG 1955 Query 19069 GAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTT 19128 |||||| | || |||| ||||| |||||||| ||| || || ||||||||||| Sbjct 1956 GAACTTTCTTTCCGTTTAGGTATGCGTCCTTGGATCGCTGTAGCTTATTCAGCTCCTGTA 2015 Query 19129 GCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCT 19188 || || || ||| || ||| || | || || | ||||||||||| ||| || | | Sbjct 2016 GCTGCTGCTCTTGCTGTATTCGTTATTTACCCTATCGGTCAAGGTTCTTTTTCTGATGGT 2075 Query 19189 ATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAAC 19248 |||||||| |||||| |||||| ||||| | |||| |||||||||| || ||||||||| Sbjct 2076 ATGCCTTTAGGTATTTCTGGTACTTTCAATTTCATGATTGTATTCCAAGCAGAACATAAC 2135 Query 19249 ATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTT 19308 ||||| |||||||| ||||||||||| ||||| |||||||| || || || ||| ||||| Sbjct 2136 ATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTT 2195 Query 19309 AGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAGGTA 19368 ||| ||||| ||||| | || || || || ||| | ||||||||||||||| | | | Sbjct 2196 TCTGCTATGCATGGTTCATTAGTAACTTCTTCTCTTATTCGTGAAACTACTGAAAACGAA 2255 Query 19369 TCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCT 19428 ||| ||| ||| ||||| || || ||||||||||| ||||| ||||| ||||| ||| Sbjct 2256 TCTGCTAACGCTGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCT 2315 Query 19429 CATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTA 19488 || || || || ||||| | |||||||| || || || || ||||| ||||| || Sbjct 2316 CACGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCTTTTAACAACTCTCGTTCATTA 2375 Query 19489 CATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGC 19548 || |||||||| |||||||||||||| || | |||||||| | || | || | Sbjct 2376 CACTTCTTTTTAGCTGCTTGGCCTGTTGTATGTATTTGGTTCACTGCTTTAGGTATTTCA 2435 Query 19549 ACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGA-CAACAATGG 19607 || |||||||| ||||| || ||||| ||||| ||||| || || | || |||| || Sbjct 2436 ACTATGGCATTTAACTTAAACGGCTTCAACTTCAACCAATCAGTTGTAGATTCACAA-GG 2494 Query 19608 TCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGG 19655 |||||| ||| | ||||||||||||||| | || ||||||||||| || Sbjct 2495 TCGTGTAATTAACACTTGGGCTGACATTATTAACCGTGCTAACCTTGG 2542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141142680405558