Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2126 102 9e-17 >seq2126 Length=41412 Score = 102 bits (112), Expect = 9e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| | |||||||| ||||| ||||| || ||||| ||||| || || |||||| || Sbjct 20855 GGCGTGCGCAACTCGCTGCTGGTGGCCCCCATGCCCACCGCCTCCACCAGCCAGATCCTG 20914 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGG 55588 |||||||||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 20915 GGCAACAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACGTGCGCCGG 20965 Score = 89.7 bits (98), Expect = 6e-13 Identities = 119/162 (73%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG- 53427 |||||||| || ||||| |||||||| ||| ||||||||||| |||| || ||||| Sbjct 17011 GGCATCTATGACACGCTGAAGGAGTGCGCCTGCATCTCCAAGTCCGCGGGCGGCATCGGG 17070 Query 53428 -TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCG 53486 | |||| ||| | ||| |||| | | |||| | ||| || || |||||| | Sbjct 17071 CTGTCCA-TGCAC-AACATCCGCTCCACCGGCTCCTACATCCGCGGCACCAACGGCACCT 17128 Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGG 53528 || | || ||||| || ||||| || ||||||||| |||||| Sbjct 17129 CCAACGGCATCGTCCCCATGCTGCGGGTCTTCAACGACACGG 17170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547191026429800