Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq947 82.4 6e-11 >seq947 Length=48402 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 111101 TGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCG 111160 |||| |||||||| || || ||||||||||| ||||| || |||| ||| || | Sbjct 33264 TGCAGATTTTTGTGAAGACCTTGACCGGCAAGACCATCACGCTGGAGGTGGAGTCCTCGG 33323 Query 111161 ATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCAA 111219 | || ||| | || || || ||| ||||| || ||| | |||| | || || Sbjct 33324 ACACTATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCGCCTGACCAG 33382 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | || || | ||| ||||| || | |||||| || ||||||| || || Sbjct 33383 CAGCGCCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTGGCCGACTACAAC 33442 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || || || ||||| || ||| | ||| |||| ||||||||||||| Sbjct 33443 ATCCAGAAGGAGTCTACCCTGCATCTGGTGCTGCGCCTGCGCGGTGGCA 33491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421792430851576