Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq3544 590 7e-164 seq3157 457 1e-123 >seq3544 Length=2542 Score = 590 bits (654), Expect = 7e-164 Identities = 678/912 (74%), Gaps = 0/912 (0%) Strand=Plus/Plus Query 169372 CACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTGATGATCCCCTGCCTGCTGGC 169431 |||||| |||||| | || |||||||||| || || | ||||| || | | | Sbjct 1631 CACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTTTTAATGATTCCTACTTTATTAAC 1690 Query 169432 AGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCCCCTGTGGACATCGACGGCAT 169491 |||||| ||| || || || | || || | ||| || ||||| || || || || || Sbjct 1691 AGCAACTACTGTATTTATTATTGGTTTTATTGCTGCACCTCCTGTAGATATTGATGGTAT 1750 Query 169492 CCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 169551 ||| || || || | |||||| | | || ||||||||||| || |||||||| || | Sbjct 1751 CCGTGAGCCAGTATCAGGTTCTTTATTATACGGTAACAACATTATTACTGGTGCTATTAT 1810 Query 169552 GCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATCTGGGAAGCAGCAAGTCTCGA 169611 || |||| || || || ||| | |||||||| || || |||||||| || | || Sbjct 1811 TCCTACTTCAAATGCTATTGGTATGCACTTCTACCCAATTTGGGAAGCTGCTTCATTAGA 1870 Query 169612 TGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTCATCGGCAT 169671 |||||||| || ||||||||||||| |||| | | || | ||| || ||||||| || Sbjct 1871 CGAATGGTTATATAACGGTGGTCCTTACCAATTAATCGTTTGCCATTTTATCATCGGTAT 1930 Query 169672 CTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGTCTGGGTATGCGCCCTTGGAT 169731 | ||||| |||||||||||||||||| | || | ||| | |||||||| |||||||| Sbjct 1931 TTGCGCTTATATGGGTCGTGAGTGGGAACTTTCTTTCCGTTTAGGTATGCGTCCTTGGAT 1990 Query 169732 CTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTCTACCCGTT 169791 | ||| ||||| || ||||| || || || || ||||| ||| | | ||||| | Sbjct 1991 CGCTGTAGCTTATTCAGCTCCTGTAGCTGCTGCTCTTGCTGTATTCGTTATTTACCCTAT 2050 Query 169792 TGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACAT 169851 || ||||| || || ||||| | ||||||| | ||||| || || || || || | ||| Sbjct 2051 CGGTCAAGGTTCTTTTTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAATTTCAT 2110 Query 169852 GCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGC 169911 | | || |||||||| || || |||||||| |||||||| |||||||||||||||||||| Sbjct 2111 GATTGTATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGC 2170 Query 169912 GGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCT 169971 || || |||||||| || | ||| || ||||| ||| | || ||||| ||| Sbjct 2171 TGGTGTATTTGGTGGTTCATTATTTTCTGCTATGCATGGTTCATTAGTAACTTCTTCTCT 2230 Query 169972 TGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 170031 | | |||||||| || || ||||| || ||| ||||||||| |||||||||||||| Sbjct 2231 TATTCGTGAAACTACTGAAAACGAATCTGCTAACGCTGGTTACAAATTCGGTCAAGAAGA 2290 Query 170032 AGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGC 170091 ||| || |||||||||||||| |||||||| ||||||||||| | || |||||||| || Sbjct 2291 AGAAACTTACAACATCGTTGCAGCTCACGGCTACTTCGGTCGTTTAATTTTCCAATATGC 2350 Query 170092 TTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCAT 170151 ||| || |||||||| |||||| | |||||||| | || || ||||||||||| | || Sbjct 2351 TTCTTTTAACAACTCTCGTTCATTACACTTCTTTTTAGCTGCTTGGCCTGTTGTATGTAT 2410 Query 170152 CTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAA 170211 |||||||| ||| | ||| | || || ||||| || ||| | ||||| ||||||||||| Sbjct 2411 TTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTTAACTTAAACGGCTTCAACTTCAA 2470 Query 170212 CCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCG 170271 ||| || | | ||| || |||||||| | ||||| ||||| ||| || | ||||| Sbjct 2471 CCAATCAGTTGTAGATTCACAAGGTCGTGTAATTAACACTTGGGCTGACATTATTAACCG 2530 Query 170272 TGCTGGTCTTGG 170283 |||| ||||| Sbjct 2531 TGCTAACCTTGG 2542 >seq3157 Length=2513 Score = 457 bits (506), Expect = 1e-123 Identities = 618/861 (72%), Gaps = 0/861 (0%) Strand=Plus/Plus Query 170589 GGGTGGTTCGATGTCCTGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGG 170648 || ||||| || | | || || ||||| ||||| || |||||||| || || ||| Sbjct 1634 GGTTGGTTTGACATTGTTGACGATTGGCTACGTCGTGACCGCTTTGTATTCGTAGGGTGG 1693 Query 170649 TCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACG 170708 ||||| | | ||||| || ||||||||||||||| |||| | ||| |||| || || Sbjct 1694 TCTGGGTTATTACTTTTCCCTACTGCTTATCTTGCAGTTGGTGCATGGTTTACAGGAACT 1753 Query 170709 ACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAAT 170768 |||||||| ||| |||||| || || ||| | || || || || | |||||| ||| Sbjct 1754 ACATTTGTAACATCTTGGTATACTCATGGATTAGCTAGCTCATATTTAGAAGGTTGCAAT 1813 Query 170769 TTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT 170828 || | || ||||| || || || || ||| || ||||||||||||| | | | ||| Sbjct 1814 TTTTTAACTGCGGCAGTTTCTACACCAGCTAATAGTATGGGTCATTCTTTATTATTCCTT 1873 Query 170829 TGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAAT 170888 ||||||||||| | || || ||||| || |||| ||| | || || || ||| | Sbjct 1874 TGGGGTCCTGAAGCACAAGGTGATTTTACTCGTTGGTGTCAATTAGGCGGCCTTTGGGCT 1933 Query 170889 TTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATC 170948 ||| || || || || | |||| ||| || ||||| |||||||| || |||||||| Sbjct 1934 TTTACAGCACTTCATGGTTCGTTTGGTCTTATTGGTTTTATGCTTCGTCAATTTGAAATT 1993 Query 170949 AGTCGTCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTG 171008 ||| ||| ||| | || || || ||||| || || || | || || ||| | Sbjct 1994 GCACGTTCAGTAAAAATTCGTCCTTATAACGCAATTGCGTTTTCAGCGCCAATTGCTCTT 2053 Query 171009 TTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCC 171068 ||||| || ||| | || || || | || || || ||||||| || |||||| Sbjct 2054 TTTGTTTCTGTTTTCTTAATTTACCCATTAGGTCAATCTGGTTGGTTTTTTGCACCTAGT 2113 Query 171069 TTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACA 171128 ||||| |||||||| || ||||| ||| | | || | |||||||| || ||||||||| Sbjct 2114 TTTGGTGTTGCAGCGATATTCCGTTTCATTTTATTTTTCCAAGGTTTTCATAACTGGACA 2173 Query 171129 CTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCA 171188 | |||||||||||||||||||||||||| ||| | | || || ||| | ||||||||| Sbjct 2174 TTAAATCCATTTCATATGATGGGTGTTGCTGGTGTTTTAGGTGGCGCACTTCTTTCTGCA 2233 Query 171189 ATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTT 171248 |||||||||| |||||||| |||||| | | ||||||||| ||| || || || || Sbjct 2234 ATTCATGGTGCAACAGTAGAAAATACTCTTTTTGAAGATGGAGATGGTGCTAATACTTTC 2293 Query 171249 AAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTC 171308 || ||| || | || || | ||||| || |||||| | || || || |||||||| Sbjct 2294 CGTGCTTTTAACCCAACACAAGCAGAAGAAACCTATTCTTTTGTAACAGCAAATCGTTTT 2353 Query 171309 TGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTG 171368 ||||| || ||||||||| | || || ||||| |||||||| || ||||||||| || Sbjct 2354 TGGTCTCAAATTTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGTTG 2413 Query 171369 TTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAAT 171428 || ||||| || | ||||||||| | ||| | | || | ||||| | || | ||| Sbjct 2414 TTCGTTCCAGTAACTGGTCTTTGGATGAGTGCTATTGGTGTAGTTGGTTTAGCATTAAAT 2473 Query 171429 CTTAGGGCTTATGATTTCGTA 171449 | | || |||||||||||| Sbjct 2474 TTACGTGCATATGATTTCGTA 2494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592171373545520