Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq32 89.7 6e-13 >seq32 Length=101482 Score = 89.7 bits (98), Expect = 6e-13 Identities = 273/422 (65%), Gaps = 0/422 (0%) Strand=Plus/Plus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740 || || || |||||||| || || ||||| || || |||| ||||| | || || Sbjct 36506 TTGAGTGGATCCACGTGATTTGCATACACGTGTGCATCACCCAATACGTGAACAAAATCA 36565 Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800 || | | || || | ||| || ||||| ||||| || | ||| ||||| Sbjct 36566 CCAGCAACCAGCCCACACACGTGTGCCACCATTCGGGTCAACAATGCGTACGATGCTATA 36625 Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC 145860 || || || || || || |||| ||| | ||| ||||| |||| || ||| | ||| Sbjct 36626 TTAAATGGTACACCGAGTCCCAAGTCGCACGATCGCTGATACATTTGACAGCTCAATTCC 36685 Query 145861 CCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 || | || ||||||||||| || | | ||| || || || || ||||| | || || Sbjct 36686 CCATCAGCAACGTAGAACTGACAAAACATGTGACATGGTGGTAGAGCCATCTCTGGAAGA 36745 Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCC 145980 || || ||||| ||||| || || | | |||| | |||||| ||||||| | Sbjct 36746 GCCAATGGATTCCACGCGGTTAGCACCAAGCGCCTGTCATTGGGGTTATTCTTGATTTTA 36805 Query 145981 CCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACG 146040 || || || |||| || || || || | || || || | | || Sbjct 36806 TGAATGAGATCATTGAGTTGATCGACCCCTTTGCCGGAATAGTCGGCATACATGTTTGAA 36865 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCC 146100 ||| | || || ||||| | |||||| ||||| || || ||||| || ||||| |||| Sbjct 36866 TACTCTGCACCAAAGTGACGCCACTGAAACCCATACACTGGCCCAAGATCCCCCTCCTCC 36925 Query 146101 CT 146102 || Sbjct 36926 CT 36927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590070309155200