Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq634 95.1 1e-14 seq429 82.4 6e-11 >seq634 Length=251403 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || | ||| |||| |||||| || ||||||||||| |||||||| || | Sbjct 209649 TTCCTCCTCTCAAACGGAGGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAATCTG 209590 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | | || | | || |||| ||| || || || |||| | | |||||| || | Sbjct 209589 CTAATGTGCGCCCATCTTCCAACTGCTTTCCAGCGAAAATCAAACGCTGCTGATCAGGTG 209530 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| ||||| || || | ||| ||| ||| | |||| Sbjct 209529 GAATTCCCTCCTTGTCCTGAATCTTAGACTTGACATTTTCGATAGTGTCAGAAGACTCCA 209470 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 |||| ||| |||||||| || || | ||||| ||||| |||||||| | ||| Sbjct 209469 CCTCCAGGGTGATGGTCTTCCCTGTGAGTGTTTTCACAAAGATTTGCATCTCGAA 209415 >seq429 Length=364352 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 |||||||||| | || |||| || || || ||||||||||| |||||||| |||||| Sbjct 147038 CCCCCTCGCAAGCGAAGAACCAAGTGTAACGTTGACTCCTTTTGGATGTTATAATCCGCC 146979 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061 ||||| | | || |||| ||| || || || |||| | ||||||||| || Sbjct 146978 AGGGTGCGCCCATCTTCCAACTGCTTTCCAGCGAAAATCAATCTCTGCTGATC 146926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422254671270080