Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq221 95.1 1e-14 >seq221 Length=83180 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||||||| |||| || || ||||| ||| ||| || | || Sbjct 44076 ATGCAGATTTTCGTCAAAACACTGACTGGGAAGACCATAACCCTCGAGGTCGAGTCTTCA 44017 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || ||||| |||||| ||||| || || | || ||||| Sbjct 44016 GATACGATTGAGAATGTCAAGTCGAAAATTCAGGATAAGGAGGGGATCCCGCCTGATCAG 43957 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||||| ||||| || || || || | || ||| || |||| ||||||||| Sbjct 43956 CAGAGACTGATCTTCGCTGGGAAGCAGCTTGAGGATGGGCGTACATTGGCAGATTACAAT 43897 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| ||||| ||||| || ||| ||||| | || || || ||||| Sbjct 43896 ATTCAGAAGGAGTCTACACTGCACTTGGTGCTTCGGTTGCGTGGAGG 43850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410792394204320