Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq32 113 3e-20 >seq32 Length=101482 Score = 113 bits (124), Expect = 3e-20 Identities = 383/594 (64%), Gaps = 2/594 (0%) Strand=Plus/Plus Query 97036 TGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATA 97095 |||||| |||| | ||| | |||||| |||| | ||| ||||| || || ||||| | Sbjct 36500 TGCTCTTTGAGTGGATCCACGTGATTTGCATACACGTGTGCATCACCCAATACGTGAACA 36559 Query 97096 AATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTA 97155 || || |||| ||| | || || || || | ||| | || || | | || Sbjct 36560 AAATCACCAGCAACCAGCCCACACACGTGTGCCACCATTCGGGTCAACAATGCGTACGAT 36619 Query 97156 GCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAA 97215 || || ||||| || || || ||||||| || |||| ||||| | |||||| Sbjct 36620 GCTATATTAAATGGTACACCGAGTCCCAAGTCGCACGATCGCTGATACATTTGACAGCTC 36679 Query 97216 AGCTTTCCATCACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTT 97275 | | |||||| || || ||||||| || | ||||| || || | ||||| | | Sbjct 36680 AATTCCCCATCAGCAACGTAGAACTGACAAAACATGTGACATGGTGGTAGAGCCATCTCT 36739 Query 97276 GGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGT 97335 |||| | | || |||||| || | || || | || || | ||||| | | Sbjct 36740 GGAAGAGCCAATGGATTCCACGCGGTTAGCACCAAGCGCCTGTCATTGGGGTTATTCTTG 36799 Query 97336 ATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGA 97395 || ||| ||| | | || | |||||| || |||| || ||| | | || || Sbjct 36800 ATTTTATGAATGAGATCATTGAGTTGATCGACCCCTTTGCCGGAATAGTCG-GCATACAT 36858 Query 97396 CCTTGA-TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCC 97454 |||| || ||||| ||||| || | ||| || || ||||| || || ||||| || || Sbjct 36859 GTTTGAATACTCTGCACCAAAGTGACGCCACTGAAACCCATACACTGGCCCAAGATCCCC 36918 Query 97455 TTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCA 97514 || || || || || |||| | ||| | ||| | ||| |||||| ||||||| Sbjct 36919 CTCCTCCCTCTCTGTGAGGCCAATCGAATCAAGATATTCACGAGAGCCATTTCCATCCCA 36978 Query 97515 AATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAA 97574 ||| || | || ||| | ||| | | ||| |||| |||||||||| | Sbjct 36979 AATATGGATTCCTTTGTCTGATAATTCTGTCGCATTGGTACTTCCTTTGATAAACCAGAG 37038 Query 97575 CAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | ||||| | | ||||||||||| || | ||| || || | ||||||||| Sbjct 37039 GAGCTCTTCTGCCAGCCCTCTCCAAAAGACACGCTTTGTGGTGAGGAGAGGAAA 37092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346780280741600