Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq634 84.2 1e-11 >seq634 Length=251403 Score = 84.2 bits (92), Expect = 1e-11 Identities = 117/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294 || ||||||||||| || |||||||| | |||||||| || || | | ||||||| Sbjct 209575 TCTTCCAACTGCTTTCCAGCGAAAATCAAACGCTGCTGATCAGGTGGAATTCCCTCCTTG 209516 Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354 || ||||| ||| | || | || | || | || || || |||| |||||| Sbjct 209515 TCCTGAATCTTAGACTTGACATTTTCGATAGTGTCAGAAGACTCCACCTCCAGGGTGATG 209456 Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTCGAA 34397 || || || ||||| |||||||||||||| ||||| |||||| Sbjct 209455 GTCTTCCCTGTGAGTGTTTTCACAAAGATTTGCAT--CTCGAA 209415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068535052800