Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq32 129 5e-25 >seq32 Length=101482 Score = 129 bits (142), Expect = 5e-25 Identities = 357/542 (66%), Gaps = 4/542 (1%) Strand=Plus/Minus Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATG-CAATCTCGATATAACTTGAG 20036 ||| |||| || ||||| |||| || |||||||| | | || |||| || ||| | Sbjct 37158 GATAGAACAGGGACTGGGACGTATTCAAAATTTGGAAAGACGATG-CGATTCAATTTGCG 37100 Query 20037 AAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTT 20096 || |||||| | | || || || || || ||||||| ||| | | |||||| | Sbjct 37099 GCATACATTTCCTCTCCTCACCACAAAGCGTGTCTTTTGGAGAGGGCTGGCAGAAGAGCT 37040 Query 20097 ATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGAT 20156 | |||||||| |||||| || ||| | || || | ||| |||||| | | || Sbjct 37039 CCTCTGGTTTATCAAAGGAAGTACCAATGCGACAGAATTATCAGACAAAGGAATCCATAT 36980 Query 20157 TTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAG 20215 |||| | | |||| ||| ||| | | | | ||| | ||| | | | | Sbjct 36979 TTGGGATGGAAATGGCTCTCGTGAATATCTTGATTCGATTGGCCTC-ACAGAGAGGGAGG 36921 Query 20216 AGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTG 20275 |||||||| | || || |||||||| ||||| ||| | || ||||| || || ||| Sbjct 36920 AGGGGGATCTTGGGCCAGTGTATGGGTTTCAGTGGCGTCACTTTGGTGCAGAGTATTCAA 36861 Query 20276 ACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAA 20335 ||||| | | | |||| || |||| || |||||| | | || | ||| || || Sbjct 36860 ACATGTATGCCGACTATTCCGGCAAAGGGGTCGATCAACTCAATGATCTCATTCATAAAA 36801 Query 20336 TTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGC 20395 | || | ||||| || ||||| | | | || ||| ||||| | | | | | Sbjct 36800 TCAAGAATAACCCCAATGACAGGCGCTTGGTGCTAACCGCGTGGAATCCATTGGCTCTTC 36741 Query 20396 CTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAAT 20455 | |||||| | || |||||||| ||| | || || || ||||||||| || |||| Sbjct 36740 CAGAGATGGCTCTACCACCATGTCACATGTTTTGTCAGTTCTACGTTGCTGATGGGGAAT 36681 Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515 || |||||||||||||| ||||| || ||||||| ||||| || || ||||| | Sbjct 36680 TGAGCTGTCAAATGTATCAGCGATCGTGCGACTTGGGACTCGGTGTACCATTTAATATAG 36621 Query 20516 CA 20517 || Sbjct 36620 CA 36619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399179718751600