Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq354 84.2 2e-11 >seq354 Length=2136 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| || || | || || || | |||||| || || || ||||||||||| | Sbjct 1936 CCTCCTCTCAAGCGAAGCACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAATCTGCC 1995 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| | || ||||| || || |||||| |||| ||||| |||||||| || || Sbjct 1996 AACGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCAGGGGGA 2055 Query 143078 ATGCCTTCTTTGTC 143091 || ||||| ||||| Sbjct 2056 ATACCTTCCTTGTC 2069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507008822841600