Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq429 87.8 1e-12 >seq429 Length=364352 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/237 (68%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 33135 AATCTTCA--CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATT 33192 |||| ||| || |||| || || | ||||| || || || ||||| ||||| || || Sbjct 147048 AATCATCATCCCCCCTCGCAAGCGAAGAACCAAGTGTAACGTTGACTCCTTTTGGATGTT 146989 Query 33193 GTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTG 33252 ||||| | || || | || ||||| ||||||||| || || || | ||||| Sbjct 146988 ATAATCCGCCAGGGTGCGCCCATCTTCCAACTGCTTTCCAGCGAAAATCAATCTCTGCTG 146929 Query 33253 GTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTT 33312 || | || || || ||||| || |||| | || || | | |||||| || Sbjct 146928 ATCAGGTGGGATCCCCTCTTTATCCTGAATCTTCGACTTGACATTCTCAATCGTATCAGA 146869 Query 33313 GGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | | || |||||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct 146868 TGACTCTACTTCCAGAGTAATAGTTTTTCCCGTCAGGGTTTTAACGAAAATCTGCAT 146812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318774181110240