Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq221 82.4 5e-11 >seq221 Length=83180 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | |||||| | || || || ||||| ||| | || || | || Sbjct 44076 ATGCAGATTTTCGTCAAAACACTGACTGGGAAGACCATAACCCTCGAGGTCGAGTCTTCA 44017 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || | ||| |||||| ||||| ||||| | || | || Sbjct 44016 GATACGATTGAGAATGTCAAGTCGAAAATTCAGGATAAGGAGGGGATCCCGCCTGATCAG 43957 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||| ||||| || || || || ||| || |||| ||||||||| Sbjct 43956 CAGAGACTGATCTTCGCTGGGAAGCAGCTTGAGGATGGGCGTACATTGGCAGATTACAAT 43897 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||||||| ||||| || || |||| | || || || |||||| Sbjct 43896 ATTCAGAAGGAGTCTACACTGCACTTGGTGCTTCGGTTGCGTGGAGGA 43849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358120959111520