Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq221 84.2 2e-11 >seq221 Length=83180 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || ||||| |||||||| || ||||| ||| ||||| || || ||| Sbjct 43880 GTAGACTCCTTCTGAATATTGTAATCTGCCAATGTACGCCCATCCTCAAGCTGCTTCCCA 43939 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || | ||| || || || || || || || || || ||| || || Sbjct 43940 GCGAAGATCAGTCTCTGCTGATCAGGCGGGATCCCCTCCTTATCCTGAATTTTCGACTTG 43999 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | || ||||| || | ||| | || || || ||||| ||| Sbjct 44000 ACATTCTCAATCGTATCTGAAGACTCGACCTCGAGGGTTATGGTCTTCCCAGTCAGTGTT 44059 Query 114366 TTTACAAAAATCTGCATGG 114384 || || ||||||||||||| Sbjct 44060 TTGACGAAAATCTGCATGG 44078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129894058560