Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq634 89.7 4e-13 >seq634 Length=251403 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| |||||| || ||||||||||| || || ||||| || |||||||| || Sbjct 209647 CCTCCTCTCAAACGGAGGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAATCTGCT 209588 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| ||||| || || || | ||||| |||||||||||||| | || Sbjct 209587 AATGTGCGCCCATCTTCCAACTGCTTTCCAGCGAAAATCAAACGCTGCTGATCAGGTGGA 209528 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCC 39669 | || || ||||| | | | || | || | || ||| || ||||| | ||| Sbjct 209527 ATTCCCTCCTTGTC-CTGAATCTTAGACTTGACATTTTCGATA--GTGTCAGAAGACTCC 209471 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCG 39723 || |||| || || || || || || | ||||| || ||||| ||||| ||| Sbjct 209470 ACCTCCAGGGTGATGGTCTTCCCTGTGAGTGTTTTCACAAAGATTTGCATCTCG 209417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347365874461040