Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq429 86.0 4e-12 >seq429 Length=364352 Score = 86.0 bits (94), Expect = 4e-12 Identities = 164/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 34747 AATCATTTCCTCCCCTC--AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 |||||| | |||||| || | | ||||||||| | || || || || ||||| Sbjct 147048 AATCATCATCCCCCCTCGCAAGCGAAGAACCAAGTGTAACGTTGACTCCTTTTGGATGTT 146989 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| |||| ||| | || |||| |||| ||| ||||| || || || | || ||||| Sbjct 146988 ATAATCCGCCAGGGTGCGCCCATCTTCCAACTGCTTTCCAGCGAAAATCAATCTCTGCTG 146929 Query 34865 GTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCA 34922 || | || | |||||| || || ||||||| ||||| || || |||| ||| Sbjct 146928 ATCAGGTGGGATCCCCTCTTTATCCTGAATCTTCGACTTGAC--ATTCTCAATCGTATCA 146871 Query 34923 CCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||| || || | || || ||||||||||| || || || || || |||||||| Sbjct 146870 GATGACTCTACTTCCAGAGTAATAGTTTTTCCCGTCAGGGTTTTAACGAAAATCTGCAT 146812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630118304640