Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq457 143 1e-29 >seq457 Length=513114 Score = 143 bits (158), Expect = 1e-29 Identities = 265/385 (69%), Gaps = 4/385 (1%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| | | |||||| | |||||| ||||||| | || || |||||||| || ||| Sbjct 208812 TCAACCCTTTGCATAAAGAGATCTGGGATCCACAACCCGTAGAACAAATCTCTTGCCCTC 208871 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 ||||||||| ||||||||||| | | || | | || |||||||| | |||||| Sbjct 208872 GCTTCTTCTTTGCCGTGATTCTTCCTCAATTCAAGCCAGTCGAAAATATCAGCGTGCCAA 208931 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || || || || || ||||| |||||||| || || || || ||||| || ||||| Sbjct 208932 GGCTCCAAGTACATGGCAAACGCTCCTTTTCTCTTCCCCCCTCCCTGATCAACATATCTG 208991 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161 || || |||||||| || | ||| || || | ||| | ||| ||| ||||| | | Sbjct 208992 GCCGTGTCATTGAACACACGGAGCATAGGTACAATACCATTCGAAGTTCCATTTGTTCCA 209051 Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCAT-GA-ATACCGATTCCACCAGCCC 26219 |||| | || || |||| ||| |||| | |||| || | |||||| || || || | Sbjct 209052 CGAATATAAGAACCAGTCGCTCTGATAT--TATGCATAGACAGACCGATGCCCCCTGCAC 209109 Query 26220 ATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTT 26279 || || || ||||| || | || || |||| |||| || |||||| | Sbjct 209110 TCTTGGAGATGCAAGCACACTCCTTCAGAGTGTCATAAATGCCTTCAATACTATCATTCT 209169 Query 26280 TCATTCCTAATAAAAAACAAGAAGA 26304 |||| | | ||||| || ||||| Sbjct 209170 TCATGCAGATCAAAAAGCACGAAGA 209194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037286146000