Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq429 87.8 3e-12 >seq429 Length=364352 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || ||||||| |||| |||||||||||||| | ||||| || ||| Sbjct 146812 ATGCAGATTTTCGTTAAAACCCTGACGGGAAAAACTATTACTCTGGAAGTAGAGTCATCT 146871 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || || |||||||| || || || || || || Sbjct 146872 GATACGATTGAGAATGTCAAGTCGAAGATTCAGGATAAAGAGGGGATCCCACCTGATCAG 146931 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || |||||||||| || || |||||| | |||||| Sbjct 146932 CAGAGATTGATTTTCGCTGGAAAGCAGTTGGAAGAT 146967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731863949408000