Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq634 125 1e-23 seq429 125 1e-23 >seq634 Length=251403 Score = 125 bits (138), Expect = 1e-23 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 192303 AATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATA 192362 ||| || || ||||| | ||| | || ||||| || |||| ||| || ||| ||||| Sbjct 209654 AATGATTCCTCCTCTCAAACGGAGGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATA 209595 Query 192363 ATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATC 192422 ||| | |||||| || |||| ||||| || || ||||| || || || | ||| ||||| Sbjct 209594 ATCTGCTAATGTGCGCCCATCTTCCAACTGCTTTCCAGCGAAAATCAAACGCTGCTGATC 209535 Query 192423 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGA 192482 |||||| ||||| || || || || || ||| || ||||| |||| || || || Sbjct 209534 AGGTGGAATTCCCTCCTTGTCCTGAATCTTAGACTTGACATTTTCGATAGTGTCAGAAGA 209475 Query 192483 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || ||||| || || || | |||||| | ||| || ||||| Sbjct 209474 CTCCACCTCCAGGGTGATGGTCTTCCCTGTGAGTGTTTTCACAAAGATTTGCAT 209421 >seq429 Length=364352 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || || ||||| || | ||| || ||| |||||||| | | || || |||| ||| Sbjct 147020 ACCAAGTGTAACGTTGACTCCTTTTGGATGTTATAATCCGCCAGGGTGCGCCCATCTTCC 146961 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 || || || ||||| || || |||||||| ||||||||||| || || |||||||| || Sbjct 146960 AACTGCTTTCCAGCGAAAATCAATCTCTGCTGATCAGGTGGGATCCCCTCTTTATCCTGA 146901 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || || ||||| || | ||| || || |||||||| |||||||| ||||| Sbjct 146900 ATCTTCGACTTGACATTCTCAATCGTATCAGATGACTCTACTTCCAGAGTAATAGTTTTT 146841 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||||| || |||||||| Sbjct 146840 CCCGTCAGGGTTTTAACGAAAATCTGCAT 146812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984468899988000