Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq232 96.9 4e-14 >seq232 Length=44964 Score = 96.9 bits (106), Expect = 4e-14 Identities = 211/309 (68%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||||||||| || | | |||||| || || ||||| |||| | || ||| Sbjct 12056 GCCTTTTGGTACTCGCCAACTCTCTTCTCGAAGAAATTTGTCTTTCCCTGCAAAGAAATC 11997 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | |||||||| ||| || |||| ||||| ||| || || || | | Sbjct 11996 AGTTCCATCCAATCGAATGGATTGGCAACATTGTACACCTTGTCATTCCCCAGGGCAACC 11937 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || | || || ||||| || |||||||| ||||||| | |||||||||||||| Sbjct 11936 AGAAGTCTATCAGCTACAAATTCAATGTACTGTGACATGAGCCTCGCGTTCATGCCGATC 11877 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGC-CTCG--ACG 868927 || | || ||||| | |||| | |||||| ||||| | || ||||| ||| ||| Sbjct 11876 AGGTCGACAGGCAGGGCGTCGCAAATAAACTCCTTCTCTAATTCAACGGCGTTCGTCACG 11817 Query 868928 ATGATCTGC-CTGGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCA 868986 || |||||| | | | | || || |||||||| ||||| | ||||| ||||| Sbjct 11816 AT-ATCTGCGATTCTCTCCT-TGCTGA--GCTTGTTGTTGAGCAAGGAGTAGATGAGGCA 11761 Query 868987 GGCAAAGTC 868995 ||||| || Sbjct 11760 TGCAAAATC 11752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107066983078960