Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq429 127 2e-24 seq634 111 1e-19 >seq429 Length=364352 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 ||||||||||| || ||||||| || || || ||||||||||| || |||||||| | Sbjct 146809 ACGATGCAGATTTTCGTTAAAACCCTGACGGGAAAAACTATTACTCTGGAAGTAGAGTCA 146868 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || | || | || || ||||| || || ||||| || || || || ||| Sbjct 146869 TCTGATACGATTGAGAATGTCAAGTCGAAGATTCAGGATAAAGAGGGGATCCCACCTGAT 146928 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | ||||| || || || || ||| |||| ||| | | | | || | |||||| Sbjct 146929 CAGCAGAGATTGATTTTCGCTGGAAAGCAGTTGGAAGATGGGCGCACCCTGGCGGATTAT 146988 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || || |||||||||| | || ||||| || || Sbjct 146989 AACATCCAAAAGGAGTCAACGTTACACTTGGTTCTTCGCTTGCGAGGGGG 147038 >seq634 Length=251403 Score = 111 bits (122), Expect = 1e-19 Identities = 169/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | ||||| || || || || || || || || || || || | | Sbjct 209420 GATGCAAATCTTTGTGAAAACACTCACAGGGAAGACCATCACCCTGGAGGTGGAGTCTTC 209479 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||||| || ||||| || ||||| || || ||||| Sbjct 209480 TGACACTATCGAAAATGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCACCTGATCA 209539 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || |||||||| || || || || ||| |||| ||| | | | | |||||||||| Sbjct 209540 GCAGCGTTTGATTTTCGCTGGAAAGCAGTTGGAAGATGGGCGCACATTAGCAGATTATAA 209599 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 ||| |||||||| || || | || ||||| | || ||| | ||||| | |||||| Sbjct 209600 CATCCAAAAGGAGTCTACCTTGCATTTGGTCCTCCGTTTGAGAGGAGGAATCATTGAGCC 209659 Query 24943 A 24943 | Sbjct 209660 A 209660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892651126400