Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq457 105 1e-17 >seq457 Length=513114 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142959 ATTTATACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCTTGCAT 143018 ||||| | |||| |||| ||||||| ||||| || | | || | || ||||| Sbjct 411682 ATTTACAGAGATGAAGACGAGTGGAAATCTTGGCAAGCTAAAGGGGACACTGTTGTGCAT 411741 Query 143019 ATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTA 143078 ||||| || ||| |||||| |||| | | | || || || ||| | || ||||| || Sbjct 411742 ATAGATCTCCGGAAATGGGCAGATGCTATGGTCATTGCTCCTTTATCTGCTAATACTCTA 411801 Query 143079 GCAAAAATAGCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGAT 143138 || |||||||| | ||| | |||||||||||||| |||| ||| || |||| ||||| Sbjct 411802 GCTAAAATAGCTCATGGTTTGTGCGATAATTTACTGACATGTATTGTGCGAGCTTGGGAC 411861 Query 143139 ATAAATAAACCTCTTATTTTTTGTCCCGCTATGAATAGCCTTATGTGG 143186 | || || || | || | || || ||||||| | |||||||| Sbjct 411862 TTCAACAAGCCAATGCTTCTGGCACCAGCAATGAATACCTTTATGTGG 411909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903401262476800