Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq634 111 1e-19 >seq634 Length=251403 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| | |||||||| | || ||| ||||| ||||| ||||| | Sbjct 209647 CCTCCTCTCAAACGGAGGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAATCTGCT 209588 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| | || ||||| || ||||| || |||||||||||||||||||| | || Sbjct 209587 AATGTGCGCCCATCTTCCAACTGCTTTCCAGCGAAAATCAAACGCTGCTGATCAGGTGGA 209528 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||| || | | |||| || | ||||| || ||||| Sbjct 209527 ATTCCCTCCTTGTCCTGAATCTT-AGACTTGACATTTTCGATAGTGTCAGAAGACTCCAC 209469 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || ||||| | ||||| |||||||| ||||| Sbjct 209468 CTCCAGGGTGATGGTCTTCCCTGTGAGTGTTTTCACAAAGATTTGCAT 209421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328700474649600