Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq634 113 1e-19 seq429 95.1 3e-14 >seq634 Length=251403 Score = 113 bits (124), Expect = 1e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| |||||||| || || ||||| |||| ||||| ||||||||| ||||| Sbjct 209436 AAAACACTCACAGGGAAGACCATCACCCTGGAGGTGGAGTCTTCTGACACTATCGAAAAT 209495 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || |||||| || || || | | || ||| Sbjct 209496 GTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCACCTGATCAGCAGCGTTTGATTTTC 209555 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||||||||||||||| | || || || ||||| ||| |||| || |||||| Sbjct 209556 GCTGGAAAGCAGTTGGAAGATGGGCGCACATTAGCAGATTATAACATCCAAAAGGAGTCT 209615 Query 206365 AC 206366 || Sbjct 209616 AC 209617 >seq429 Length=364352 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||| ||||||| || ||||| || | || Sbjct 146827 AAAACCCTGACGGGAAAAACTATTACTCTGGAAGTAGAGTCATCTGATACGATTGAGAAT 146886 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || ||||| || || || || || ||| | || ||| Sbjct 146887 GTCAAGTCGAAGATTCAGGATAAAGAGGGGATCCCACCTGATCAGCAGAGATTGATTTTC 146946 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||||||||||||||| | || |||| ||||| ||| |||| || ||||| Sbjct 146947 GCTGGAAAGCAGTTGGAAGATGGGCGCACCCTGGCGGATTATAACATCCAAAAGGAGTCA 147006 Query 206365 ACTCTTCACCTTGTT 206379 || | ||| | ||| Sbjct 147007 ACGTTACACTTGGTT 147021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181807474970480