Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq880 1088 0.0 >seq880 Length=74269 Score = 1088 bits (1206), Expect = 0.0 Identities = 1587/2223 (71%), Gaps = 36/2223 (2%) Strand=Plus/Minus Query 184981 AACAAAATTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTG 185040 |||||||||||||||||||| |||| | | || || || |||||| | || || || Sbjct 5245 AACAAAATTTCCAAAATTTAGCCAAGCTCTTGCCCAAGACCCAACAACTCGTAGGTTATG 5186 Query 185041 GTATGGATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTT 185100 || ||| | ||||| || ||||||||||| |||||||| |||||| ||||| | || Sbjct 5185 GTTTGGTATCGCAACAGCTCATGACTTTGAAAGTCATGATGGTATGACTGAAGAAAGATT 5126 Query 185101 ATATCAAAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGC 185160 |||||||||| | || ||| |||| |||||||| | |||||||| || ||||| | Sbjct 5125 ATATCAAAAAATCTTCGCTTCACATTTTGGTCAATTAGCAATTATTTTCTTATGGACATC 5066 Query 185161 AGGTAATTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACA 185220 |||||||||| | ||| | |||||||||||||| || ||||||| || ||| |||| Sbjct 5065 AGGTAATTTATTCCATGTTGCATGGCAAGGTAATTTCGAACAGTGGGTTCAAGATCCACT 5006 Query 185221 ACATGTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGA 185280 ||||| | ||| || || ||| ||| ||||| || |||||||| ||| |||| || Sbjct 5005 TCATGTAAGACCCATTGCTCATGCAATTTGGGACCCACATTTTGGACAACCTGCAGTTGA 4946 Query 185281 TGCATACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTAT--TCTGGACTGTAT 185338 |||| |||| | ||| || | |||||| |||| ||| | ||||| | ||| Sbjct 4945 AGCATTTACACGCGGTGGTGCTTCAGGTCCTGTAAACA--TTGCAACCTCTGGTGTTTAT 4888 Query 185339 CATTGGTGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTT 185398 || |||||||| ||| ||||||| | |||||| |||| || ||| || | |||| Sbjct 4887 CAGTGGTGGTATACAATTGGTATTCGTACTAATCAAGAACTATACACTAGT--TCAATTT 4830 Query 185399 -----ATGATTCTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAA 185453 |||||| || ||| |||| |||| ||| | | |||||| | ||||| Sbjct 4829 TTTTAATGATTTTAGCGGCA---GTATTTTTATTTGCAGGTTGGTTACATTTACAACCAT 4773 Query 185454 AGTTTGCACCTAAGCTTGCT--TGGTTTAAAGATAATGAGAACA-GATTAAATCATCATC 185510 ||| |||| |||| | ||||||||| || ||| | || |||||||||| ||| Sbjct 4772 CATTTCAACCT--GCTTTATCATGGTTTAAAAATGCTGA-ATCACGATTAAATCACCATT 4716 Query 185511 TATCAGTTCTATTTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAA 185570 || | | | ||||||| | ||||| | || ||| |||| || || | || || || | Sbjct 4715 TAGCTGGTTTATTTGGTGTTAGTTCACTAGCTTGGACTGGACACTTAGTTCATGTTGCTA 4656 Query 185571 TACCTGCATCAAGAGGA-ATCACTGTAGATTGGACTAATTATGTGTTTATGAAACCTCAT 185629 | || || ||| | ||| | || ||| | |||| ||||| | | | | ||| ||| Sbjct 4655 TTCCAGCTTCACGTGGACAACA-TGTTGGTTGGGATAATTTTTTAACTGTATTACCACAT 4597 Query 185630 CCTGCAGGTTTACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGAT 185689 || ||||||||| ||||| ||||||||||| ||| || |||||| ||||||| ||| Sbjct 4596 CCAGCAGGTTTAACACCATTTTTTACAGGAAATTGGTCCGTATATGCAGAAAATCCAGAT 4537 Query 185690 GGATTAAATCAAATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATG 185749 || || |||| ||| | || ||||||||||| ||||| ||||| ||| | Sbjct 4536 ACTGCAACACATTTATTTTCAACATCTGAAGGTTCTGGAACTGCAATTTTAACTTTCCTT 4477 Query 185750 GGTGGTTTCCATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTT 185809 ||||||||||||||||||||| | |||||||| |||||||| |||||||| || | Sbjct 4476 GGTGGTTTCCATCCACAAACACAAAGTTTATGGTTAACTGATATGGCACATCACCATTTA 4417 Query 185810 GCAATAGGAGTAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGT 185869 || || | ||||| || ||| |||| ||||||||||| ||| | || || ||||| Sbjct 4416 GCTATTGCTGTAATCTTTATTCTTGCTGGTCATATGTACCGAACTATTTTCGGGATTGGA 4357 Query 185870 CACTCAATGAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGT 185929 || ||| || || | || |||| | || ||| | |||| || ||| Sbjct 4356 CATAGTATGCGTGAAATTTTAGATTCACACGTTGCTCCTGCAGGTAAATTAGGAGCTGGT 4297 Query 185930 CATAAAGGATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTT 185989 |||| || |||| ||| || |||| | |||||||| | || |||||| | ||| | Sbjct 4296 CATACTGGGTTATTTGATACTGTTAATAATTCATTACATTTCCAATTAGGTTTAGCATTA 4237 Query 185990 GCATCTCTAGGTG----TTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATC 186045 ||| | | || ||||| | | |||| ||||||||||| |||||| | || | Sbjct 4236 GCAAGTGTTGGAACAATTTGTT-CAA---TGGTTGCACAACATATTTACTCACTTCCTCC 4181 Query 186046 CTATGCTTTCATAGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATA 186105 ||||| || ||||||| | ||| |||||||| ||| ||||||| ||||||||||| Sbjct 4180 ATATGCATTTTTAGCACAAGATTTTACAACGCAAGCAGCTTTATATGTACATCATCAATA 4121 Query 186106 CATTGCAACTGCTCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGA 186165 ||||| | | ||| |||||||||||| || || ||||| || |||||| | || Sbjct 4120 TATTGCTGGATTTATTATGTGTGGTGCTTTTGCTCACGGTGCAATCTTCTTTGTTCGTGA 4061 Query 186166 CTTTGATCCT-ACTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAG 186224 || ||||||| | || || || || ||||| | | | ||| || | || ||||||| Sbjct 4060 CTATGATCCTGAAGCT-AACAAAGATAATGTATTAGCACGTATGTTAGAACATAAAGAAG 4002 Query 186225 CAATTATAAGTCACTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCT 186284 | ||||| || ||||||||||| |||| | || ||||||||| | || | | Sbjct 4001 CGATTATTTCACATTTAAGTTGGGTGAGTTTATTTTTAGGTTTCCATACTCTTGGCTTAT 3942 Query 186285 ATGTCCATAATGATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAAC 186344 |||| ||||||||||||||| ||||||||| || || | ||| || |||||||||| Sbjct 3941 ATGTACATAATGATGTAGTACAAGCATTTGGTACACCAGAAAAACAAATTTTAATTGAAC 3882 Query 186345 CTATATTTGCACAGTGGATACAGGCAGCATCAGGTAAGATGATGTATGGATTAAGTTTCT 186404 || | || ||||| ||||| || |||||| ||| || | |||||||| ||||| Sbjct 3881 CTGTCTTCGCACAATGGATTCAAGCAGCACAAGGAAAAACAGCTTATGGATTTGATTTCT 3822 Query 186405 TACTATCTGATCCAAATAGTGCTGCAAGTCTAGCAGCAGAGAGTATGCCTGGTAATCATT 186464 || |||| | || | ||| | |||||| | ||| | ||||| |||| | | | Sbjct 3821 TATTATCAACTTCACAAAGTACAGCAAGTGTTGCAAGCCAAAGTATT--TGGTTACC-TG 3765 Query 186465 ACTGGATGAGTGCTATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTG 186524 ||| | || || ||| || | ||||| | ||| || |||| ||||| | || Sbjct 3764 GTTGGTTACAAGCAATTAATAATGATACAAATTCATTATTTTTAACAATTGGACCAGGTG 3705 Query 186525 ATTTATTAGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCA 186584 |||| |||||||| ||||| |||||| | || |||||||| ||||| ||||| |||| | Sbjct 3704 ATTTCTTAGTTCACCATGCAATTGCATTAGGTTTACATACAACAACATTAATTTTAGTAA 3645 Query 186585 AGGGTGCATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATT 186644 | |||||||||||||| ||||||| ||| | || |||||||| |||||||| || ||| Sbjct 3644 AAGGTGCATTAGATGCCCGAGGTTCTAAATTAATGCCAGATAAAAAAGATTTTGGTTATA 3585 Query 186645 CATTCCCTTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTT 186704 ||||||||||||||||||||| | |||||||| ||||||| ||||| |||||||| | Sbjct 3584 GTTTCCCTTGTGATGGTCCAGGCCGTGGTGGTACATGTGATATTTCTGCATGGGATGCAT 3525 Query 186705 TCTATCTCTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACT 186764 | ||| | |||| |||||| || |||||||| | |||| || |||| || | Sbjct 3524 TTTATTTAGCTGTTTTCTGGATGTTAAATACAATTGGTTGGGTTACATTCTATTTCCATT 3465 Query 186765 GGAAGAACCTTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATC 186824 |||| | | | || ||||||||||||| |||||||| |||| ||||||| Sbjct 3464 GGAAACATTTAGGTATTTGGCAAGGTAATGTTAATCAATTCAACGAATCATCAACATATT 3405 Query 186825 TTATGGGTTGGTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACA 186884 | ||||| ||||| | |||||| | ||| ||| | | |||| | || |||| Sbjct 3404 TAATGGGGTGGTTACGTGATTATTTATGGTTAAATTCATCACAACTAATTAATGGTTACA 3345 Query 186885 CACCATTTGGTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAG 186944 |||||||||||||||| | | || || ||||| |||||||| || ||||| |||||| Sbjct 3344 ATCCATTTGGTATGAATAGTTTATCAGTTTGGGCTTGGATGTTTTTATTTGGACATTTAA 3285 Query 186945 TTTGGGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTG 187004 ||| |||||||| ||||||||| | ||||||||| | |||||||||||||| ||||||| Sbjct 3284 TTTATGCAACAGGTTTTATGTTCTTAATTTCTTGGCGTGGTTATTGGCAAGAATTAATTG 3225 Query 187005 AGACTCTTGCTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATA 187064 | || | || ||||||||| || | || ||| |||| || ||| | |||| ||||| Sbjct 3224 AAACATTAGCATGGGCACATGAACGTACACCATTAGCTAACTTAGTTCGATGGAAAGATA 3165 Query 187065 AACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTTGCCATAG 187124 ||||||| || | || |||||||||||| | ||||| |||||| ||||||| | | Sbjct 3164 AACCAGTAGCTTTATCAATTGTTCAAGCACGTCTAGTAGGTTTAGCACATTTCTCAGCTG 3105 Query 187125 GATTTGTGCTTACCTATGCACCATTCCTGATAGCAACAACAGCAAGTAGATACGGTTAGA 187184 | | ||| | || |||||| ||||| | || || ||||| || ||| | ||||| | Sbjct 3104 GTTATGTATTAACATATGCAGCATTCTTAATTGCCTCAACATCAGGTAAGTTTGGTTA-A 3046 Query 187185 ACT 187187 ||| Sbjct 3045 ACT 3043 Score = 801 bits (888), Expect = 0.0 Identities = 1485/2173 (68%), Gaps = 127/2173 (6%) Strand=Plus/Minus Query 182846 TTAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGAT 182905 ||||| ||||| || | ||||| |||||||| ||||| ||||| || ||||| |||||| Sbjct 7500 TTAGCTAAAGGTCCAACTACAACAACATGGATTTGGAACTTACATGCTGATGCGCATGAT 7441 Query 182906 TTTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTT 182965 ||||||| || ||| |||||| |||| | |||||||||| | ||| |||||| ||| Sbjct 7440 TTTGATACACAAACTAATGATCTTGAAGAAATTTCAAGAAAAGTCTTTAGTGCACATTTT 7381 Query 182966 GCTCATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGTTT 183025 | || ||||||| |||||| | ||| | || || | | ||| || ||||| | ||| Sbjct 7380 GGCCAATTAGGTATTATCTTTATTTGGTTAAGTGGTATGTACTTCCACGGTGCACGTTTT 7321 Query 183026 TCAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTT 183085 || || ||| || ||||| | || ||||| ||| | ||||| |||| ||||| ||| Sbjct 7320 TCTAATTATGAAGCTTGGTTAACTGATCCAACACATATTAAACCAAGTGCACAAGTTGTT 7261 Query 183086 TGGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTATT 183145 ||||| || |||||||||| || || |||| ||| |||| |||| ||||||||| Sbjct 7260 TGGCCAATTGTTGGTCAAGAAATTTTAAATGCTGATGTTGGTGGTGGATTCCAAGGTATT 7201 Query 183146 AGAATTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGGTATAACAAATGAAACTCAA 183205 |||||| || ||||| || || | |||||||| | ||||| |||| |||| ||| Sbjct 7200 CAAATTACTTCGGGTTTTTTCCAATTATGGAGAGCTTCAGGTATTACAAGTGAATTACAA 7141 Query 183206 CTAATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCTGGTGCA 183265 || | ||| | |||| |||| ||||||| |||| |||||| ||||||| Sbjct 7140 TTATATACAACAGCTATTGGTGGTTTAATTATGGCTGCAGCAATGTTTTTTGCTGGTTGG 7081 Query 183266 TTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCTATGATG 183325 || |||| ||| ||||| || || ||| ||||| || ||||||||||| ||| | Sbjct 7080 TTCCATTATCATAAAGCTGCACCAAAATTAGAGTGGTTCCAAAATGTAGAATCAATGCTA 7021 Query 183326 AATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGGATGGGCAGGACATTTAATT 183385 ||||| || | || ||||| || ||||||||| ||||| ||||| |||||| ||| Sbjct 7020 AATCACCATTTAGCTGGTTTACTAGGTCTTGGTAGTTTAGCGTGGGCTGGACATCAGATT 6961 Query 183386 CATATTTCAATCCCAACTAATATGTTGATGGATGCCATAGATGCTGGCACACCAATGGTA 183445 ||| ||||| | ||| ||||| ||| | ||||||||| Sbjct 6960 CATGTTTCATTACCAGTTAATAAATTGTT---------AGATGCTGGA------------ 6922 Query 183446 TTAAATGGTAGATTGATAGAGACACTAACTGATATACCACCACCTCATG---TTCTCTGT 183502 |||||| | || || || ||| ||| |||| || | | Sbjct 6921 -------GTAGAT-----------CCAAAAGAAATTCCATTACCACATGAATTTTTATTC 6880 Query 183503 AGTCCTAGTGTTGCAGGT-CAAATATTACCTGGTTTAAGTAGTGGAGTATCTAACTTCTT 183561 | | | || || || ||| ||| ||| |||| || || || || ||||| Sbjct 6879 AATTC-AGATTTAATGGCGCAATTATATCCTAGTTTTGCTAAAGGTTTAGCTCCATTCTT 6821 Query 183562 CTCACTCAACTGGATGGCATTTACAGATTTCCTCACCTTTAAAGGTGGTTTGAATCCTGT 183621 | | | |||| || || ||||| | || ||| |||||||| | || || Sbjct 6820 TACTTTAGATTGGAATCAATATAGTGATTTTTTAACATTTCAAGGTGGTCTAAACCCAAC 6761 Query 183622 AACTGGCAGTCTTTGGATGACAGATATAGCACATCATCACCTAGCAATAGCAGTTATGTT 183681 ||| || | | ||| | || |||| ||||| ||||| |||| || || ||| | || Sbjct 6760 AACAGGTGGATTATGGTTAACTGATACTGCACACCATCATGTAGCTATTGCGGTTTTATT 6701 Query 183682 TATCATTGCAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAAGAGAT 183741 | | | |||||||||||||| || ||||| |||||||||||||| || ||||| || Sbjct 6700 TTTAGTAGCAGGTCATATGTACCGTACAAATTGGGGTATTGGTCATAGCATCAAAGAAAT 6641 Query 183742 ATTAGATGGTCAGAATGG---TTTCCCACAGGGTGTCACACACAGAGGATTATATGAATT 183798 ||||| | || || || ||| || |||| || | |||| |||||||| | Sbjct 6640 TTTAGAAGCCCATAAAGGACCTTTTACA---GGTGAAGGTCATAAAGGACTATATGAAAT 6584 Query 183799 TCTAGCAGAATCAAGACATGCACAACTATCACTGAATCTGGCAATGCTAGGATC--TATC 183856 | || || ||| | ||||||||| || || | ||| | ||| | | || || |||| Sbjct 6583 TTTAACAACTTCATGGCATGCACAATTAGCAATTAATTTAGCACTATTTGGTTCATTATC 6524 Query 183857 AGTATCATAGTTTCACATCATATGTATGCAATGCCACCTTATCCATATCTTGGTATTGAA 183916 | || || ||| | |||||||||||||| |||||||| ||||| ||| | | | ||| Sbjct 6523 A--ATTATTGTTGCGCATCATATGTATGCTATGCCACCATATCCGTATTTAGCAACTGAT 6466 Query 183917 TATCCAACAGTAGTAGGATTATTCACCCATCATATGTGGATAGGTGGTTTTCTTATTGTG 183976 ||| ||| | || |||||| || || |||| ||||| ||||||||| |||||| Sbjct 6465 TATGGTACACAACTATCATTATTTACACACCATACATGGATTGGTGGTTTTTGTATTGTT 6406 Query 183977 GGTGCATCAGCACATGCTTCAATTGCTATGATAAGAGACTATAATCCTGTTCAACATATG 184036 ||||| || |||| | | ||| ||| | | || ||| |||| ||| || Sbjct 6405 GGTGCTGGTGCCCATGGTGCGATTTTCATGGTTCGTGATTATGATCCAA--CAAATAATT 6348 Query 184037 GGAA--ATGTATTAGATAGAATACTTAAATC-TAGAGATGCAATCATCAGTCACTTGAAC 184093 || | |||||||| | || ||| || | | |||||||| || || || || Sbjct 6347 ACAATAACTTATTAGATCGTGTA-TTACGTCATCGTGATGCAATTATTTCACATTTAAAT 6289 Query 184094 TGGGTATGCATCTTTTTAGGTTTTCATAGTTTTGGTCTTTATATTCACAATGATATTATG 184153 ||||| || || || |||||||||||||| |||||| | |||||||||||||||| ||| Sbjct 6288 TGGGTTTGTATTTTCTTAGGTTTTCATAGCTTTGGTTTATATATTCACAATGATACAATG 6229 Query 184154 AGAGCATTGGGTAGACCTAATGATCTATTCAGTGATACAGCAATACAATTACAACCTGTA 184213 || ||||| ||| |||| | ||| | ||| ||||| ||||| ||||||||||| | Sbjct 6228 AGTGCATTAGGTCGACCACAAGATATGTTCTCAGATACGGCAATTCAATTACAACCAATT 6169 Query 184214 TTTGCACAGTCTGTTCAGAGATTACATGCTTCA--------TTATA-------TAATGTC 184258 ||||| || | || || | |||| | || || || |||| Sbjct 6168 TTTGCTCAATGGGTACAAAATACACATTTTACAGCACCAGGTTTTACAGCACCAAATGCA 6109 Query 184259 TCTG-ATGTA-----------TTTGGTGGATCAACCACAATGGTTGGTGGTAAGATTGCT 184306 | | | ||| | |||||| | | ||||| ||| |||| Sbjct 6108 TTAGCAAGTACTAGCCCAAGTTGGGGTGGAGATATTGTAGCAGTTGGGAATAAAGTTGC- 6050 Query 184307 AATGCT-CCTTTTGTACTAGGTACAGCAGACTTTATGATACATCACATACACGCTTTCCA 184365 |||| | || || |||||||| ||||||||||| |||| || || || |||||| Sbjct 6049 AATGATGCCGATTACTTTAGGTACATCAGACTTTATGGTACACCATATTCATGCTTTCAC 5990 Query 184366 GATTCATGTTTGTGTATTAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATT 184425 |||||||| ||||||||||| | || ||||| ||||| | | | |||| || Sbjct 5989 AATTCATGTGACAGTATTAATTCTATTAAAAGGTGTGTTATATGCACGTAGTTCACGCTT 5930 Query 184426 AATACCAGATAAGAGTAAGTTAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGG 184485 ||| |||||||| ||| ||||| || |||||||||||||| ||||| || | || || Sbjct 5929 AATTCCAGATAAAGCTAATTTAGGCTTTAGATTCCCTTGTGACGGTCCAGGCCGTGGTGG 5870 Query 184486 CACTTGTCAGGTATCAGGATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTG 184545 || ||||| ||||| ||||||||||||||| | ||||||||||||||||| |||| Sbjct 5869 TACATGTCAATCATCAGCTTGGGATCATGTATTCTTAGGTTTATTCTGGATGTACAATTC 5810 Query 184546 CATCTCTATAGTAATCTTCCACTTTAGTTGGAGAATGCA---AGATGTATGGGGT-CTAT 184601 || || || ||||| |||||||||||||||| |||||| |||||| |||||| || | Sbjct 5809 AATTTCAATCGTAATTTTCCACTTTAGTTGGAAAATGCAATCAGATGTTTGGGGTACTGT 5750 Query 184602 --------------------------CAGGAGGTAACTTTGCTCAGAGTTCAATTACAAT 184635 |||| ||||||||||| |||||| | | |||||| Sbjct 5749 AGGTGCAAATGGAATTTCACATATTACAGGTGGTAACTTTGCACAGAGTGCGAATACAAT 5690 Query 184636 CAATGGATGGTTGAGAGACTTCTTATGGTCACAGTCAAGTCAAGT-TCTCAATAGTTATG 184694 ||||| ||||| | || || | ||| | || ||| ||||| ||||| |||| Sbjct 5689 TAATGGTTGGTTACGTGATTTTCTTTGGGCTCAATCATCACAAGTAATTCAAT-CATATG 5631 Query 184695 GACAAG--ACATCAGCATGTATGGTTTGCTATTTCTT-GGAGCACATTTTGTATGGGCAT 184751 | || ||||||| || ||||| | |||||| || ||||| ||||| ||||||| Sbjct 5630 GTTCAGCATTATCAGCA--TACGGTTTAAT-TTTCTTAGGTGCACACTTTGTTTGGGCAT 5574 Query 184752 TCAGTTTGATGTTCCTATGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTG 184811 | ||||| ||||| ||| |||||| | || || |||||||| || || || || |||| Sbjct 5573 TTAGTTTAATGTTTTTATTTAGTGGTCGTGGCTATTGGCAAGAATTAATTGAATCAATTG 5514 Query 184812 CTTGGGCACATAACAAATTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTA 184871 |||||||||||| ||||||||| | || || | ||||||||| | ||| | |||| Sbjct 5513 TTTGGGCACATAATAAATTAAAAGTAGCTCCAGCAATTCAACCACGTGCATTAAGTATTA 5454 Query 184872 CACAAGGACGTGCTGTTGGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGG 184931 | ||||| ||||| || || ||||| |||| ||| | || |||||||| ||||||||| Sbjct 5453 CTCAAGGTCGTGCAGTCGGCGTTGCTCACTATTTATTAGGGGGTATTGCGACAACATGGT 5394 Query 184932 CATTCTTCTTTGC 184944 |||||||||| || Sbjct 5393 CATTCTTCTTAGC 5381 Score = 738 bits (818), Expect = 0.0 Identities = 764/996 (77%), Gaps = 6/996 (1%) Strand=Plus/Minus Query 189656 TGGCCTCAGTTCTGTGAGTGGGTAACATCAACAAACAATAGAATCTATGTTGGTTGGTTT 189715 ||| ||| || |||||||||||||| || | || | | || | ||||||||| Sbjct 61333 TGGGCTCGTTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTT 61274 Query 189716 GGTGTACTCATGATTCCATGCT-TGCTCGCAGCAGCAGCATGCTTCGTTGTTGCATTTAT 189774 |||||| | ||||| || | || | | | ||| | || ||| | | |||||||| Sbjct 61273 GGTGTATTAATGATCCC-TACTCTATTAACTGCAACTACAGTATTCATCATCGCATTTAT 61215 Query 189775 TGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTA 189834 || || || || || || || ||||| ||| | ||||| ||| | |||||| | | || Sbjct 61214 CGCTGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCTGTTTCTGGTTCATTATTATA 61155 Query 189835 TGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTT 189894 |||||||||||||| || ||||| ||||| || | ||||| || |||||| |||| || Sbjct 61154 CGGTAACAACATCATCTCAGGTGCGGTTGTTCCAACTTCAAACGCGATTGGTTTACATTT 61095 Query 189895 CTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGTCCTTACCA 189954 |||||||||||||||||| || | ||||||||||| | ||||| |||||||||||||| Sbjct 61094 CTACCCAATCTGGGAAGCTGCTTCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCA 61035 Query 189955 GTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAGTGGGAATT 190014 || || | | || ||| | | ||| | | | |||||||| | |||||||||| Sbjct 61034 ATTAGTTGTATGTCATTTCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAGTGGGAATT 60975 Query 190015 ATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGC 190074 ||| | | | |||||||| | || |||||| ||||||||| ||||||||||| |||| Sbjct 60974 ATCTTTCCGTTTAGGTATGCGTCCATGGATCGCTGTTGCTTACTCAGCACCAGTTGCTGC 60915 Query 190075 AGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCC 190134 ||| || |||||| | | |||||| | ||||| ||||| ||||||||||||||||| Sbjct 60914 AGCTACAGCTGTATTCATCATTTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCC 60855 Query 190135 TTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCCT 190194 |||||||||||||||||||||||||||||| ||||||||||||| || || || ||| | Sbjct 60854 ATTAGGTATCTCAGGTACATTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACATCTT 60795 Query 190195 TATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTGC 190254 |||||||||||||||||| |||||| || ||| | |||||||| |||||||||| || Sbjct 60794 AATGCACCCATTCCATATGTTAGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCAGC 60735 Query 190255 AATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTAGAGTCACA 190314 ||||| |||||||||||||| ||||| ||||| | ||||| |||| || ||| Sbjct 60734 TATGCACGGTTCACTTGTAACTTCTTCATTAATCCGTGAAACTACTGAAAACGAATCAGC 60675 Query 190315 GAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCTGCTCATGG 190374 ||| | |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| Sbjct 60674 TAACGAAGGTTACAAATTTGGTCAAGAAGAAGAAACTTACAACATCGTAGCTGCTCATGG 60615 Query 190375 TTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTTTACACTT 190434 |||||||||| | | |||||||| || |||||||| |||||||| | |||||||| Sbjct 60614 TTACTTTGGTCGTTTAATCTTCCAATACGCTTCATTTAACAACTCTCGTTCATTACACTT 60555 Query 190435 CTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATTTGCACAAT 190494 ||||||||| | | || ||| || | ||||| || | | ||||||| || || Sbjct 60554 CTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTAT 60495 Query 190495 GGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTAAAAT 190554 |||||| |||||||||||||||||||| ||||| || || || ||| |||||||| | Sbjct 60494 GGCATTTAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGT 60435 Query 190555 TGTTCCAACA--TGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGCAT 190612 | ||||| |||| ||| || ||||| | || ||| | ||||| |||||||||||| Sbjct 60434 AAT--CAACACTTGGGCTGATATTGTTAACCGTGCTAACTTAGGTATTGAAGTAATGCAT 60377 Query 190613 GAAAGAAATGCACACAACTTCCCACTAGACCTAGCT 190648 ||||||||||| |||||||| ||||| || ||||| Sbjct 60376 GAAAGAAATGCTCACAACTTTCCACTTGATTTAGCT 60341 Score = 565 bits (626), Expect = 3e-156 Identities = 744/1031 (72%), Gaps = 25/1031 (2%) Strand=Plus/Plus Query 190806 TTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGTCTTATATTAT 190865 ||||||||||| | |||||| | || ||||| |||||||||||||| | |||||| Sbjct 49513 TTGATGACTGGCTTCGTCGTGATCGTTTCGTATTTGTAGGTTGGTCTGGTTTATTATTAT 49572 Query 190866 TACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTTGTTACTAGTT 190925 |||| ||||||| || || | ||||| ||||| || |||| |||||||||||| | Sbjct 49573 TACCTTGTGCTTATTTAGCATTAGGTGGCTGGTTAACTGGAATTACATTTGTTACATCAT 49632 Query 190926 GGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTGACAGCAGCAG 190985 ||||||||||||| | || ||||||| | ||||| || || || ||||| |||| Sbjct 49633 GGTATACACATGGTTTAGCTTCTTCATTTTTAGAAGGTTGTAATTTCTTAACAGCTGCAG 49692 Query 190986 TATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGTCCAGAGGCAC 191045 | || ||||||| || |||||||||| |||||||| |||||||| ||||| |||| Sbjct 49693 TTTCTACACCTGCAAATAGTATGGGTCATTCATTATTATTATTATGGGGCCCAGAAGCAC 49752 Query 191046 AAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTTGTAGCACTTCATG 191105 |||| ||| |||||||| ||| | ||||| | |||| ||||| ||| | |||| Sbjct 49753 AAGGCGACTTTACTCGTTGGTGTCAATTAGGTGGTTTATGGACTTTTGTTGCATTACATG 49812 Query 191106 GTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGATTGGTGGGTA 191165 || ||||| | | || || || ||||||||||| ||||| |||||| | | || | Sbjct 49813 GTTCATTTGCTTTAATTGGTTTTATGTTACGTCAATTTGAGATTGCACGTTCAGTAAAAA 49872 Query 191166 TTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACAAGTGTATTCT 191225 || | || || || || | ||||| || || || ||||||||| | || |||| Sbjct 49873 TTCGTCCATATAACGCAATCGCTTTCTCAGCACCAATTGCAGTTTTCGTATCAGTTTTCT 49932 Query 191226 TAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGAGTTGCAGCAA 191285 |||||||||| | ||||| | |||||||||||||| ||||| ||||| |||| Sbjct 49933 TAATCTATCCTTTAGGTCAATCTGGCTGGTTCTTTGCACCAAGTTTTGGTGTTGCCGCAA 49992 Query 191286 TCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACTCAACCCTTTCCACA 191345 |||| ||| ||| |||||| | ||||||||||| || || | ||||| ||||| | Sbjct 49993 TCTTCCGATTTATCCTATTCTTCCAAGGTTTCCATAACTGGACTTTAAACCCATTCCATA 50052 Query 191346 TGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTGCTACAG 191405 ||||||| || || ||| || |||||| ||| ||||||||||| || |||||||| || | Sbjct 50053 TGATGGGTGTAGCTGGTGTTTTAGGTGCAGCGTTACTATGTGCTATCCATGGTGCAACTG 50112 Query 191406 TACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAA 191465 || | ||||| || | ||| ||||||| | | | || |||| Sbjct 50113 TAGAAAACACATTATTTGA------------------AGATGGTGATGGTGCAAATACA- 50153 Query 191466 CCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCACTGCAAACA 191525 || | |||||| | ||||| || | ||| ||||| ||||| ||| | ||||| || Sbjct 50154 --TTCCGTGCATTTAACCCAACTCAAGCTGAAGAAACATATTCAATGGTAACTGCGAATC 50211 Query 191526 GATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTACACTTCTTGA 191585 | ||||||||||| || |||||| | ||||| || || ||| | | |||| ||||| | Sbjct 50212 GTTTCTGGTCACAAATTTTTGGTGTAGCATTTTCAAATAAACGTTGGTTACATTTCTTTA 50271 Query 191586 TGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTAGGTCTTGCAC 191645 |||| ||||| || |||| || | |||| |||| || | |||||| | || Sbjct 50272 TGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCAATTGGCGTAGTAGGTTTAGCTT 50331 Query 191646 TTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGT 191705 | |||||| | ||||||||||||||||||||||| || | || || ||||| || || | Sbjct 50332 TAAACTTACGTGCATATGATTTTGTATCTCAAGAAATTCGTGCTGCGGAAGATCCTGAAT 50391 Query 191706 TTGAAACCTTCTATACTAAGAA-CATTCTTCTTA-ATGAAGGTATGAGAGCATGGATGTC 191763 | ||||| |||||||| || || ||| || ||| |||||||| | |||| |||||| | Sbjct 50392 TCGAAACTTTCTATACAAAAAATCAT--TTATTAGATGAAGGTGTTCGAGCTTGGATGGC 50449 Query 191764 TTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAGAGGAAA 191823 | | ||| || |||||||| || || || ||||||||||| || |||| | ||||| Sbjct 50450 TGCTCAAGATCAGCCTCATGAAAAATTAGTATTCCCAGAGGAGGTATTACCACGTGGAAA 50509 Query 191824 TGCATTGTAAT 191834 || | |||| Sbjct 50510 CGCTCTTTAAT 50520 Score = 185 bits (204), Expect = 1e-41 Identities = 188/245 (77%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||||| || | || ||||| |||||||| || ||||| || ||||| ||||| || Sbjct 68721 ATGTCACATACAGTAAAAATTTATGATACATGTATTGGTTGTACACAGTGTGTTCGTGCG 68780 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 || ||| ||||| |||||||||||||||||||| || || ||||| || |||||||| Sbjct 68781 TGCCCAACAGATGTTTTAGAAATGGTTCCTTGGGACGGTTGTAAAGCTAATCAAATTGCA 68840 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || |||| | || || |||||||| || ||||| | |||||| |||| ||||| ||| Sbjct 68841 TCAGCACCACGTACAGAAGATTGTGTTGGCTGTAAACGCTGTGAATCAGCTTGTCCAACA 68900 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAACCACAAGAAGCATGGGTCTAGCA 182725 || |||||||| | |||||||| || ||||| ||||| ||| | || ||||| |||| Sbjct 68901 GATTTTTTAAGCGTACGTGTTTATTTAGGTGCTGAAACAACACGTAGTATGGGCTTAGCG 68960 Query 182726 TATTA 182730 || || Sbjct 68961 TACTA 68965 Score = 89.7 bits (98), Expect = 6e-13 Identities = 147/211 (70%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 185738 TTAACATTCATGGGTGGTTTCCATCCACAAACAGAGGCATTATGGTTGACTGATATAGCA 185797 |||||||| |||||| | | ||| ||||| | ||||||||| ||||||| ||| Sbjct 6789 TTAACATTTCAAGGTGGTCTAAACCCAACAACAGGTGGATTATGGTTAACTGATACTGCA 6730 Query 185798 CATCATCACCTTGCAATAGGAGTAATATTCATTATTGCAGGTCATATGTATAGAAGTGCT 185857 || ||||| | || || | || |||| | | |||||||||||||| | | | Sbjct 6729 CACCATCATGTAGCTATTGCGGTTTTATTTTTAGTAGCAGGTCATATGTACCGTACAAAT 6670 Query 185858 TGGGGTATTGGTCACTCAATGAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGA 185917 |||||||||||||| || || || || | ||||| |||| | ||| | Sbjct 6669 TGGGGTATTGGTCATAGCATCAAAGAAATTTTAGAAGCCCATAAAGGACC-----TTTTA 6615 Query 185918 CTAGGTGCAGGTCATAAAGGATTATATGAAA 185948 | ||||| ||||||||||||| ||||||||| Sbjct 6614 C-AGGTGAAGGTCATAAAGGACTATATGAAA 6585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631420254300800